Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02275 ATGGCTGCTTCTACTTCTCCGAACTTCTCAACATCTTTGCACAACAAAACAAAGTTTCCTTCTTCAGCAGGGAAGAAAACACTGCATCAACTTGGGTTCTCATTTTCTGTGCCATTCAATAAATCCATATGTGTCAAATCGTTTGGCACAGCGAAGTATGATGAAGTTGTGGTGGATGAAGAATTGGACAAGATTAGGAGGCTTCAGAATGGTTCAGATGTTAGAGGAGTGGCATTGGAAGGTGAAAAAGGCAGAACAGTTGACCTTACTCCACCTGCTGTTGAGGCAATATCAGAGAGTTTTGGGGAGTGGGTTATCAATGGTTTAAAGAAGGAACAAGGATACCCTGTGGAGAATGTGAGAGTGTCTCTGGGACGTGACCCTAGAATTACAGGGTCGAAATTGAGTGTTGCAGTCTTTGCAGGTCTTGCTCGTGCAGGTTGCATGGTGTTTGACATGGGACTAGCTACCACACCAGCTTGTTTCATGAGCACATTGTTGCCTCCATTTGTCTACGATGCTTCAATCATGATGACAGCGTCCCACTTGCCTTACACACGAAATGGTCTGAAATTTTTTACAAAGAGAGGTGGACTGACTTCAACAGAGGTGGAGGAAATATGTGATAAAGCGGCTAGAAAATATGCAAACAGGATGGCCAAGGTGTCTACTTTGCTTAGTGTTCTTCCAACAAAAGTTGATTTCATGAGCACTTATGCAATGCACCTACGAGAAATCATCAAGGAGAGAATCAATCATCCTCTGCATTATGACACTCCACTTCAGGGATTTCAGATAATAGTAAATGCTGGAAACGGGTCAGGAGGATTCTTCACATGGGATGTGTTGGACAAACTTGGTGCAGATACCTTTGGATCTCTGCATCTGAACCCTGATGGGATGTTTCCGAATCACATTCCCAACCCTGAGGACAAAACTGCCATGGCACTCACCAGAGCAGCAGTGCTAGAAAACTCAGCTGATCTTGGCATAGTTTTCGACACTGATGTAGACAGAAGTGGCGTGGTTGATAACAAAGGGAACCCTATAAATGGTGACAAACTCATTGCTCTTATGTCTGCCATTGTGCTAAGGGAACATCCAGGATCAACTATAGTAACTGATGCTCGCACAAGCATGGCACTCACCAGATTCATAACTGATAGAGGGGGTCACCATTGCCTATACCGTGTTGGATACAGAAATGTCATTGACAAGGGAGTTCAGCTCAACAGTGATGGAATTGAAACACATCTTATGATGGAAACTTCTGGACATGGTGCTCTCAAAGAAAACTATTTCCTTGATGATGGGGCTTACATGGTGGTCAAAATCATAATTGAAATGGTACGGATGAAGCTTGGTGGATCAAGGGAAGGGATTGGCAGTCTTATAGAAGATCTTGAAGAACCCTATGAATCAGTAGAGCTTAGGATAAACATCATCTCTGAACCACGACTTGCTAAAGCTAAAGGATCTGAGGCCATTGAAACATTCAGAAACTACGTTGAGGAAGGGAGGCTTAAAGGGTGGGAGTTAGACTCATGTGGTGATTGTTGGGTGAGTGAAGGGTGTCTTGTTGATACAAATGATGCCCCAGCTCCCATTGATGCTCAAATGTACAGGGCAAAAGTGTCAAACGATAGAGATGGACAGCATGGTTGGGTTCATATGAGGCAAAGTATTCACAACCCAAACATTGCTGTGAACCTGCAATCATCTGTTCAGGGAGGTTGTTTGTCTATGGCACGAGCTTTTAGAGACGAGTTTCTCCAAGCAAGTGGGGTTCACACATTCCTTGACATTACTCAAGTTGATAGGTTTACTGAAAATGGCTCCATTCCCTAA 1848 0.4372 MAASTSPNFSTSLHNKTKFPSSAGKKTLHQLGFSFSVPFNKSICVKSFGTAKYDEVVVDEELDKIRRLQNGSDVRGVALEGEKGRTVDLTPPAVEAISESFGEWVINGLKKEQGYPVENVRVSLGRDPRITGSKLSVAVFAGLARAGCMVFDMGLATTPACFMSTLLPPFVYDASIMMTASHLPYTRNGLKFFTKRGGLTSTEVEEICDKAARKYANRMAKVSTLLSVLPTKVDFMSTYAMHLREIIKERINHPLHYDTPLQGFQIIVNAGNGSGGFFTWDVLDKLGADTFGSLHLNPDGMFPNHIPNPEDKTAMALTRAAVLENSADLGIVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLREHPGSTIVTDARTSMALTRFITDRGGHHCLYRVGYRNVIDKGVQLNSDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIEMVRMKLGGSREGIGSLIEDLEEPYESVELRINIISEPRLAKAKGSEAIETFRNYVEEGRLKGWELDSCGDCWVSEGCLVDTNDAPAPIDAQMYRAKVSNDRDGQHGWVHMRQSIHNPNIAVNLQSSVQGGCLSMARAFRDEFLQASGVHTFLDITQVDRFTENGSIP 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02275 615 CDD PMM_PGM 68 590 - -
Spst3g02275 615 SUPERFAMILY Phosphoglucomutase, first 3 domains 351 452 IPR016055 GO:0005975|GO:0016868
Spst3g02275 615 Gene3D - 69 224 - -
Spst3g02275 615 FunFam Phosphomannomutase/phosphoglucomutase isoform B 344 465 - -
Spst3g02275 615 FunFam phosphomannomutase/phosphoglucomutase isoform X1 265 342 - -
Spst3g02275 615 SUPERFAMILY Phosphoglucomutase, first 3 domains 72 247 IPR016055 GO:0005975|GO:0016868
Spst3g02275 615 Gene3D - 265 343 - -
Spst3g02275 615 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 67 216 IPR005844 GO:0005975|GO:0016868
Spst3g02275 615 PANTHER PHOSPHOHEXOSE MUTASE 61 608 - -
Spst3g02275 615 Gene3D - 344 465 - -
Spst3g02275 615 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 351 451 IPR005846 GO:0005975|GO:0016868
Spst3g02275 615 FunFam phosphomannomutase/phosphoglucomutase isoform X1 69 224 - -
Spst3g02275 615 PRINTS Phosphoglucomutase/phosphomannomutase family signature 174 188 IPR005841 GO:0005975|GO:0016868
Spst3g02275 615 PRINTS Phosphoglucomutase/phosphomannomutase family signature 298 311 IPR005841 GO:0005975|GO:0016868
Spst3g02275 615 PRINTS Phosphoglucomutase/phosphomannomutase family signature 263 282 IPR005841 GO:0005975|GO:0016868
Spst3g02275 615 PRINTS Phosphoglucomutase/phosphomannomutase family signature 327 342 IPR005841 GO:0005975|GO:0016868
Spst3g02275 615 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 262 347 IPR005845 GO:0005975
Spst3g02275 615 SUPERFAMILY Phosphoglucomutase, first 3 domains 248 349 IPR016055 GO:0005975|GO:0016868
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02275 Spst-Chr3 65774526 65777344 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02275 3 65774526 65777344 Spst3g02275 3 65774526 65777344 ECH