Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02266 ATGGCTAAGCGCTTGATTCCCACCTTCAATCGCATTCTCGTAGAGAAAATTGTTCCTCCCTCTAAGACTAGCGCTGGCATTCTCCTCCCCGAGAAGTCTTCCCAGCTTAATTCCGGTAAGGTGATAGCAGTCGGACCCGGATCACGAGACAAGACAGGGAACTTTATTCCGGTGTCCGTCAAAGAAGGTGATCGTGTGCTCTTGCCCGAATACGGTGGAACGCAAATCAAGCTCGATGACAAAGAAATATACAAGTTATCCGTTAGCTTGAAGACGCTAAAAGACAGATTTTCTTCGAAAAATTTGATTGCGCCGTTACAAGATACACAGCAAGGGTAG 339 0.4661 MAKRLIPTFNRILVEKIVPPSKTSAGILLPEKSSQLNSGKVIAVGPGSRDKTGNFIPVSVKEGDRVLLPEYGGTQIKLDDKEIYKLSVSLKTLKDRFSSKNLIAPLQDTQQG 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02266 112 Gene3D GroES chaperonin 1 90 IPR037124 GO:0006457
Spst3g02266 112 Pfam Chaperonin 10 Kd subunit 5 86 IPR020818 GO:0005524|GO:0006457|GO:0044183
Spst3g02266 112 CDD cpn10 4 82 IPR020818 GO:0005524|GO:0006457|GO:0044183
Spst3g02266 112 PANTHER 10 KDA HEAT SHOCK PROTEIN 1 83 IPR020818 GO:0005524|GO:0006457|GO:0044183
Spst3g02266 112 FunFam 10 kDa chaperonin, mitochondrial 1 91 - -
Spst3g02266 112 SMART Cpn10_2 4 84 IPR020818 GO:0005524|GO:0006457|GO:0044183
Spst3g02266 112 SUPERFAMILY GroES-like 4 85 IPR011032 -
Spst3g02266 112 PRINTS 10kDa chaperonin signature 61 73 IPR020818 GO:0005524|GO:0006457|GO:0044183
Spst3g02266 112 PRINTS 10kDa chaperonin signature 5 20 IPR020818 GO:0005524|GO:0006457|GO:0044183
Spst3g02266 112 PRINTS 10kDa chaperonin signature 26 47 IPR020818 GO:0005524|GO:0006457|GO:0044183
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02266 Spst-Chr3 65648663 65650526 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02266 3 84 Calmodulin-binding Proteins AT5G20720 38.554 1.44e-09 51.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02266 3 65648663 65650526 Spst3g02266 3 65648663 65650526 ECH