Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02250 ATGATATCCTGGGGAGATTTGTACAACGTCTTGACAGCGGTGATTCCGCTGTATGTGGCCATGATCTTAGCGTACGGCTCGGTTCGCTGGTGGAAGATATTCTCGCCGGACCAATGCTCCGGCATAAACCGCTTCGTCGCGATCTTCGCGGTTCCGCTTCTTTCCTTCCATTTCATCTCCACCAACAACCCTTACGCGATGAACTTCCGCTTCATCGCCGCCGACACGCTCCAGAAAATTATCATGCTGTTTGCGTTGGCAATCTGGACCAACTTCACCGCCAACGGGAGCTTGGAGTGGATGATTACTATTTTCTCTCTCTCCACATTGCCCAACACGCTTGTGATGGGAATTCCACTTCTCATCGCCATGTACGGCAAATATTCGGGTAGTCTCATGGTCCAGGTGGTGGTGCTCCAGTGCATCATCTGGTACACGCTCCTCCTCTTCCTCTTCGAGTACCGCGGTGCCAAGCTCTTGATCATGGAACAGTTCCCCGAAACCGCTGCTTCCATAGTTTCCTTCAAGGTCGACTCCGATGTCGTTTCGCTCGATGGAAGGGATTTCCTCGAAACCGATGCTGAAGTCGGTGACGACGGGAAGCTCCACGTGACCGTCAGGAAGTCCAATGCTTCTAGAAGGTCCTTCATGATGACCCCTCGCCCGTCTAACCTCACCGGCGCCGAGATTTACAGTCTCAGCTCCTCCCGTAACCCCACGCCACGTGGCTCAAACTTCAACCACGCGGATTTCTACTCCATGATGGGGTACGCGCCTAGGCATTCTAACTTCGGCGCTGCGGATTTGTACTCCGTGCAGTCCACGTCACGTGGGGTCACGCCGAGGCCCTCCAATTTCGAGGAGAACTCTGCACCCGCGCCGCAGGCTATCAGCTCCCCCAGGTTCGGGTTCTACCCCGCCGTGCAGACCGCCCCCGCCGCCTACCCTGCTCCGAACCCGGAATTCTCTTCAGGGTTAACCAAGAGTGTTAGCAAGAATTCGCAGACGCAGTCACAGTCACAGCCTCAGCCTCAGCCTCAGCCTCAGTCTCAGCCGCAGGTTCAAGCTCAAGCTGCTCCTCAAGTTGCTCAACCACCCAACAGTGGTAACAAAGCCAGCCACGACGCTAAGGAGCTCCACATGTTCGTGTGGAGCTCCAGCGCTTCGCCGGTTTCTGAAGCCGGAGGCCTTCATGTGTTCACTGGAGCCGATTTCGGAGCTTCCGACCAATCGGGCCGCTCCGACCAAGGTGCCAAGGAGATTAGGATGTTGGTAGCGGACGACCACCCTCAAAATGGAGAAGCCAACAAAGCTGCAGCAGAAGGAGAATTTGGGGTTGAAGATTTGAAATTTCCAGGGAAAGAAGGGGAACACGCGGATGAAGAGGGAGAGAAAGCGGGAGCCACTGGGCTTAACAAGCTGGGTTCCAGTTCAACGGCGGAGCTACACCCAAAATCGGGCGGAGCCGCCGCGGGGAAACACTTGCCTCCTGCGAGTGTGATGACCCGTCTCATACTGATTATGGTGTGGCGTAAGCTTATCCGCAATCCCAACACTTACTCCAGCCTCATTGGTGTCATTTGGTCGCTAGTGGCGTTTAGGTGGCATGTGCACATGCCCAAAATAATAGAGCAATCAATCTCCATACTCTCTGATGCTGGTCTTGGAATGGCTATGTTCAGCTTGGGTCTCTTCATGGCTCTTCAACCCAAGATAATTGCGTGTGGGAACTCGGTTGCAACATTTGCCATGGCTGTTCGGTTCCTCACAGGTCCCGCTGTCATGGCTGCAGCTTCTATCGCTGTTGGCCTACGTGGCACCCTCTTACGTGTAGCTATTGTTCAGGCTGCACTTCCACAAGGGATTGTTCCATTTGTATTTGCAAAAGAATACAACGTCCACCCAGCCATTCTTAGCACAGGGGTTATATTTGGGATGTTGATAGCTCTACCAATTACTCTAGTCTACTACATATTACTTGTGGATTATGCTGTTATTAACAAGGATGTGGATCTTCTGAGTGGAGAGCAAAACCCACAAACTAAACTAGTATCCTTAAAGCAGAGGAGATCCTCGAGATTTTCAAGAGCAGAGAGAGAGAGAGAGAGAGGAGCAAGTACAGCTTATGGGAGACAGAGCATAGGAAAACAGGAGAAAGCTCGCATGAGCAGAGTCAAGGAAATCTAG 2187 0.5281 MISWGDLYNVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFISTNNPYAMNFRFIAADTLQKIIMLFALAIWTNFTANGSLEWMITIFSLSTLPNTLVMGIPLLIAMYGKYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKLLIMEQFPETAASIVSFKVDSDVVSLDGRDFLETDAEVGDDGKLHVTVRKSNASRRSFMMTPRPSNLTGAEIYSLSSSRNPTPRGSNFNHADFYSMMGYAPRHSNFGAADLYSVQSTSRGVTPRPSNFEENSAPAPQAISSPRFGFYPAVQTAPAAYPAPNPEFSSGLTKSVSKNSQTQSQSQPQPQPQPQSQPQVQAQAAPQVAQPPNSGNKASHDAKELHMFVWSSSASPVSEAGGLHVFTGADFGASDQSGRSDQGAKEIRMLVADDHPQNGEANKAAAEGEFGVEDLKFPGKEGEHADEEGEKAGATGLNKLGSSSTAELHPKSGGAAAGKHLPPASVMTRLILIMVWRKLIRNPNTYSSLIGVIWSLVAFRWHVHMPKIIEQSISILSDAGLGMAMFSLGLFMALQPKIIACGNSVATFAMAVRFLTGPAVMAAASIAVGLRGTLLRVAIVQAALPQGIVPFVFAKEYNVHPAILSTGVIFGMLIALPITLVYYILLVDYAVINKDVDLLSGEQNPQTKLVSLKQRRSSRFSRAERERERGASTAYGRQSIGKQEKARMSRVKEI 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02250 728 MobiDBLite consensus disorder prediction 322 371 - -
Spst3g02250 728 MobiDBLite consensus disorder prediction 275 298 - -
Spst3g02250 728 MobiDBLite consensus disorder prediction 450 467 - -
Spst3g02250 728 MobiDBLite consensus disorder prediction 450 494 - -
Spst3g02250 728 MobiDBLite consensus disorder prediction 691 706 - -
Spst3g02250 728 MobiDBLite consensus disorder prediction 688 728 - -
Spst3g02250 728 MobiDBLite consensus disorder prediction 315 374 - -
Spst3g02250 728 MobiDBLite consensus disorder prediction 275 296 - -
Spst3g02250 728 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 660 - -
Spst3g02250 728 NCBIfam auxin efflux carrier 1 660 IPR014024 -
Spst3g02250 728 Pfam Membrane transport protein 10 657 IPR004776 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02250 Spst-Chr3 65240436 65244376 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02250 1 660 Organic Solute Cotransporters AT1G70940 75.852 0.0 948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02250 3 65240436 65244376 Spst3g02250 3 65240436 65244376 ECH