Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02242 ATGGAGGCTCGAAGAGAAAGATCATCTTACTATAACGTTCTTGGTGTTAGCTCGGATTGTGACCTGGAAGAGATAAAACGTGCTTACAGAAAGCTTGCAATGCAGTGGCATCCTGATAGGTGGACAAAGACGCCTTCGTTGTTGGGTGAAGCCAAACGCAAATTCCAGCAAATTCAAGAAGCTTATTCGGTCTTGTCAGACCGCAAGAAAAGAACTATGTATGATGCGGGTTTGTATGATCCTCAAGAGGAAGAGGATGAGGGGTTTTCTGATTTTTTGGAAGAAATGTTGTCTCTCATGGCTCAAGCAAGGAGAGAGAAAAAGCATTACGATTTGGCAGAGTTGCAGGGGATGTTGATGGAAATGGCCAGAGGGTTCTAG 381 0.4436 MEARRERSSYYNVLGVSSDCDLEEIKRAYRKLAMQWHPDRWTKTPSLLGEAKRKFQQIQEAYSVLSDRKKRTMYDAGLYDPQEEEDEGFSDFLEEMLSLMAQARREKKHYDLAELQGMLMEMARGF 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02242 126 PRINTS DnaJ domain signature 11 29 IPR001623 -
Spst3g02242 126 PRINTS DnaJ domain signature 50 70 IPR001623 -
Spst3g02242 126 PRINTS DnaJ domain signature 29 44 IPR001623 -
Spst3g02242 126 ProSiteProfiles dnaJ domain profile. 9 78 IPR001623 -
Spst3g02242 126 SUPERFAMILY Chaperone J-domain 5 81 IPR036869 -
Spst3g02242 126 CDD DnaJ 10 67 IPR001623 -
Spst3g02242 126 Gene3D DnaJ domain 1 98 IPR036869 -
Spst3g02242 126 PANTHER PUTATIVE, EXPRESSED-RELATED 1 125 - -
Spst3g02242 126 SMART dnaj_3 8 70 IPR001623 -
Spst3g02242 126 Pfam DnaJ domain 10 75 IPR001623 -
Spst3g02242 126 ProSitePatterns Nt-dnaJ domain signature. 55 74 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02242 Spst-Chr3 64858005 64858765 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02242 3 76 C2H2 Transcription Factor Family AT1G74250 44.000 3.87e-14 65.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02242 3 64858005 64858765 Spst3g02242 3 64858005 64858765 ECH