Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02241 ATGGGAATACCTGATAGTTCACTATTAGATCTAATAGAAAAGGTAAGGTCTTGGGTTTCTTGGGGAGAAAGTGATTTGTGTTATTTGTCTGAGAAATTTGATATGCACCATAGCGGCAGCAAAATGTGTTGTGAGTGTAATAAAAATTTAAGTGAGATGAATCAGCACAGATACAATTGCAAGAGCTGTGGCCGTTGGTTGTGTGGGAAATGCATCGGGGGTTGTGATCTCCCAAATCTTGAATCTGACCACTCTGGATTCAGTGAAACTATTCGTTCCTGCAAGTTCTGTTCAGATGCCAATAGGAGGATGTGTTATGAGGGTCAGAGGAAGTGTAGTGAGAAAGTGCACCCATCTGTCTCTCCACAAGAGAGTCCAAGGCAAAGTCCTGAGCCACCCTCTCCATGCTTTAGTGTTGAAAGTGATAGGATCTGTTCTCCTCTGGGATCTCACTTTGAACGCTGTTTTCATGACCATGATTATGGGTATTATCCTTGTTCTGAAGTCAACAAGAGTTTGACTTCATCTGGTACTCGCCCTTCTTCGGTATCTACTCATCCATCTACCTTAAGGAGTGACGAAGAGGGGATGGAGGATTCTGGGAAGCACTTTCTCAGCCAATCACGTACATATTGTGATAATTATTCAGATATAGATTCAAGTAGCGTTAGTGCTAGACATGACACTTACAACTATAATTCTGTGGGGTCAAGTCCTTCAGATAGCCCTTCTAGGATTGGTTTTACTTCTAGTAAGGCTGGGCTTCCTGTACAGAAGGCGCAGGAGAAAAGCCCCATCCCTCAAAATGATGGTCCCTTTACCCAAGAAAGTATGGCTGTTTTAAGAAAGCCTGAGCAAGGGACTGAGGATGCATATACTACCGCTTATTTTTCTGATGACTTATCTATTTTCCGGAACCCGAATAGGATTTTGCAGAGGCCATTGGATTTTGAAAACAATGGTCTTATTTGGTTTCCCCCACCACCAGATGATGAAAATGATGACGCAGAAGGTAATTTCTTTGCATATGATGACGAGGATGATGATATTGGTGACTCAGGTGCCATGTTCTCATCCAGTAGCAGTCTTTCTAATATGTTTCCTGGAAAGGAGAAACATAATGACGGAAACAAGGAACCTTTAAAAGCTGTCATCGAAGGGCATTTCAGAGCTCTTATTTCACAGCTTTTACAAGGAGAGGGAATTCAAGTTGGTAAAGAAAATGATTCTGAGGACTGGCTTGACATAGTTGCAACAGTAGCTTGGCAGGCTGCTAACTTTGTGAGACCAGATACTAGCAAAGGTGGCAGTATGGATCCTGGTGATTATGTAAAGGTCAAATGTATAGCATCTGGGATCCCAAGTGAGAGCACCCTTATCAAAGGTGTGGTTTGCACAAAAAATATTAAGCACAAGCGCATGACCTCTCAGTACAAGAATCCTAGACTACTCCTTTTGGGAGGAGCTCTGGAATATCAGAAAGTTCCAAATCAATTGGCTTCTTTTGATACATTGTTACAGCAGGAAAATGAACATTTGAAGATGATCATTTCGAAAATTGAGGCTCTTCGGCCAAATGTTTTGCTGGTAGAAAAAAGTGTAGCTTCATGTGCCCAGGAATATTTGCTGGCAAAGGAAATATCCTTGGTGTTGAATGTTAAAAAGCCTTTGCTGGAGCGAATAGCTCGGTGCACTGGTGCTCATATCACTCCATCGGTGGATAATTTATCTAAAGCACGATTGGGCCATTGTGAGTTGTTCCGGTTAGACAGAATGGTGGAAGATCAGGAGACTGCTAATCAGATAAACAAAAAGCCATCCAAAACATTAATGTTTTTCGAAGGTTGTCCACGGCGATTGGGTTGCACGGTCTTGCTGAAGGGCACATGTCGGGAAGAACTAAAGAAAATTAAACATGTCATGCAATATGCAGTTTTTGCGGCCTACCACTTGTCACTTGAGACCTCATTCCTCGCTGATGAGGGTGCTACCCTACCTAAAATGATAGTGAAACACTCTACTGACACACCTGAGAGTGCAACTGCTGACACTGATATTTCTATGATACCTAACACCTTTTCTACAACTATGTGCCAATCAGACGCTGATGATGCATGTAGAGTGAAAGACATTGTTGGCATTGATTTACAACTTGAAAAATTGGGATCTCTGCCTGAGCAAATTGATGATCTTAGTTGTCATTCATATCCAGGCACCATGGCAGATTATAGATCGGAGAGTGTATTCTCTGATTCATACTGTGATAACTTAACTTCTAATTTGACTGTAGATTCGGATTATTTACATCCGTGCAATGAATCAGAAGGAGGCACTATTGTTAGTACGAGAGACCTTTTGCAATCAGGTTTGCAACAAACCATGGTTCAAGAGGATAGGGAGTGTGGTGAAGTTGCTGACTCAACAAAAAACAAGACTAATGAGGATGAGCATTCTGGTGAATACTTTTCTGCCACTGATGGTCATCAGAGCATATTGGTGTACTTTTCCAGTCATTGTGTTTCGAAAGGAACTGTTTGTGAACGAACTAGGTTGTTGCGCATAAAATTCTATGGCTCTTTTGATAAGCCTCTTGGGAGATATCTTCGTGATGATCTATTTGATCAAGCATGTTGCTGCCAGTCTTGTAAAGAGCCAGCAGAGGCTCATGTCCTTTGTTTTACTCACCAACAAGGAAATCTTACAATCAATGTTAGGCGCCTTCCCTCTGTAAAGTTACCAGGGGAGAGAGACGGCAAGATTTGGATGTGGCACCGGTGTCTGAGGTGTCCATTTGAGGATGGAGTTCCACCAGCAACTCGTAGAGTTTTTATGTCAGATGCAGCTTGGGGTTTATCTTTTGGAAAGTTCTTGGAACTTAGCTTTTCAAACCATGCCACTGCAAATCGAGTTGCAACCTGTGGACATTCTTTGCAGAGGGATTGCCTACGTTTTTATGGGTTTGGGAGCATGGTTGCTTTCTTCCGGTATTTCCCTATTGATATTCTCTCTGTCCATCTACCCCCATCTGTGTTGGAATTTGACCACATCCAAGAGGACTGGATTAGAAAGGAGGCAGAAGAGCTTTATATTAAAGTGGAAACTTTGTATGAGGAGATATTCAATGTGCTTGAACGGTTGGAAACAAAGATTGTATCTCCTGGTCTTGGAAATGAATCATCAGATATATCGGACATTCAAAATCACTTACTGGATTTGAAAGATATGCTACGAAGAGAAAAAACTGATTATCATTGTTTGCTAAAGTCAGGCACAGTGACTCCACAACCTGGGAAGATGGCTTTAGATATTCTGGAACTAAATCGCTTGAGGCGTTCTCTTCTTATTGGTTCACATATTTGGGATCACAGACTATACTCATTGGACTCTCTCATTAAGAGAAGTTTTAGCTCCAAGGTTAAATTAGAAAATGAATTTTGTGGCGATGTTAAAGAATTAAGAGTTGATTCATTTCACAAGGATCAGAATTTTGACTGTGGACCTGAGCAAAATAATTCCAGGCTTTCAAAATTGCATGAGTCTCACAAGAGTCATATGCTTGCAGAGCCAGACGACACACTTGAACCTTGTGGTTCAGGATCATTTGTTTGTTATAGTGAGGGAGAGAAACTACATTCAGATGGTGAACTTAGCAAAAAAATTTCAGAGTGTTTATCACCAAATGAGTCCAATCTTTCTGAGAAAATAGACTCTGCATGGACCGGAACTGATCAACCTCAAGCAAATGCTGCCCCAGTTGTAAGTATTCAGCGGTCTAATCAACATGATAGCCCTCCTTTTGGAAGGTTGACACAACCAATGAGAGTTCATTCTTTTGATTCAGCAGTAAGAGTTCATGAAAGAATCAGAAAAGTCTTGCCCTCATCTTTACATTTATCAACACTTAGATCTTTTCATGCTTCTGGTGACTATGGGAATATGGTTAGAGACCCCGTCTCTAACATATTGCAATCTTTCTTTCAAATGTTGCCTTGGGAGACACAGAAACTAAATCTGATTCTAAGCTCCACTCCATCATTCATTTCCTCTGTGTCGTGCATAGCTGAAGGGGCTCGACTGCTGCTTTCCCAAACTTATCACGGTGATAGAGTTATTGCTGTCTATGACAATGATTATTCCAGTATAATATCCTACGCCCTTAGTTCCAAGGAATATGAAGATTGGGTGTCTGGTAAGTCAGATCTTCCTGAGTGTAGCTGGATTGCTCGTGAGAGAAGCAAAGAAGACTTGGCTACCTCCAGCTTTTCTGCATGGGGGGGTAATCTGGACTTGGATTACATCAATTATGGTAGTTATGGGTCTGAAGATGTTCCATCTTCTGTTGTTGGCTCTCTTCTCCGAGACTCGAAAAGATCTATTCACTTGCAAATTTCCTTTGGAGATGATTCTGTGGGAGCTGGAGGTAAAGTGAATTTTTCTGTCACTTGCTATTTTGCAAAGCAGTTTGAATCACTTAGAAAAAAGTGCTGCCCTGATGAGATTGATTTTGTACGATCCTTGAGCCGATGCCGGAGATGGAGTGCGCAAGGAGGTAAAAGTAATGTATATTTCGCCAAGTCATTAGATGAGAGGTTTATTATTAAACAAGTGACCAAGACAGAACTGGAGTCCTTTGAAGAATTTGCACCTCAGTATTTCAAATACCTGATGGATGCCCTAAACTCGGGAGGCCCAACTTGCCTAGCCAAAATTCTTGGTATCTATCAGGTCACTGTCAAATACCCAAAAGGTGGCAAGGAAACAAAAATAGATCTGATGGTAATGGAGAATCTCTTTTACAAGAGAAATATATCCAGGGTATATGATCTCAAGGGCTCAGAAAGATCAAGATATAATCCAGACACAACTGGGACTAACAAGGTGATGCTGGACATGAATTTGTTAGAAGCATTGAGAACAAAACCCATATTTCTTGGCAGTAGGGCCAAGAGAAGACTTGAAAGAGCTGTATGGAATGACACATCCTTTTTGGCGTCTGTTGATGTTATGGACTATTCTTTGCTGGTTGGGGTGGATGATGAGCGGAAGGAGCTGGTTTTGGGGATCATTGATTTCATGAGACAATACACATGGGACAAACATTTGGAGACGTGGGTGAAGGCTTCTGGTATACTTGGGGGTCCAAAGAATGCAGCCCCCACAATAGTTTCTCCTAAACAATACAAGAAAAGATTCAGGAAGGCCATGACTACCTACTTTCTCACCTTACCTGAGCAGTGGTTATCCTGA 5247 0.4157 MGIPDSSLLDLIEKVRSWVSWGESDLCYLSEKFDMHHSGSKMCCECNKNLSEMNQHRYNCKSCGRWLCGKCIGGCDLPNLESDHSGFSETIRSCKFCSDANRRMCYEGQRKCSEKVHPSVSPQESPRQSPEPPSPCFSVESDRICSPLGSHFERCFHDHDYGYYPCSEVNKSLTSSGTRPSSVSTHPSTLRSDEEGMEDSGKHFLSQSRTYCDNYSDIDSSSVSARHDTYNYNSVGSSPSDSPSRIGFTSSKAGLPVQKAQEKSPIPQNDGPFTQESMAVLRKPEQGTEDAYTTAYFSDDLSIFRNPNRILQRPLDFENNGLIWFPPPPDDENDDAEGNFFAYDDEDDDIGDSGAMFSSSSSLSNMFPGKEKHNDGNKEPLKAVIEGHFRALISQLLQGEGIQVGKENDSEDWLDIVATVAWQAANFVRPDTSKGGSMDPGDYVKVKCIASGIPSESTLIKGVVCTKNIKHKRMTSQYKNPRLLLLGGALEYQKVPNQLASFDTLLQQENEHLKMIISKIEALRPNVLLVEKSVASCAQEYLLAKEISLVLNVKKPLLERIARCTGAHITPSVDNLSKARLGHCELFRLDRMVEDQETANQINKKPSKTLMFFEGCPRRLGCTVLLKGTCREELKKIKHVMQYAVFAAYHLSLETSFLADEGATLPKMIVKHSTDTPESATADTDISMIPNTFSTTMCQSDADDACRVKDIVGIDLQLEKLGSLPEQIDDLSCHSYPGTMADYRSESVFSDSYCDNLTSNLTVDSDYLHPCNESEGGTIVSTRDLLQSGLQQTMVQEDRECGEVADSTKNKTNEDEHSGEYFSATDGHQSILVYFSSHCVSKGTVCERTRLLRIKFYGSFDKPLGRYLRDDLFDQACCCQSCKEPAEAHVLCFTHQQGNLTINVRRLPSVKLPGERDGKIWMWHRCLRCPFEDGVPPATRRVFMSDAAWGLSFGKFLELSFSNHATANRVATCGHSLQRDCLRFYGFGSMVAFFRYFPIDILSVHLPPSVLEFDHIQEDWIRKEAEELYIKVETLYEEIFNVLERLETKIVSPGLGNESSDISDIQNHLLDLKDMLRREKTDYHCLLKSGTVTPQPGKMALDILELNRLRRSLLIGSHIWDHRLYSLDSLIKRSFSSKVKLENEFCGDVKELRVDSFHKDQNFDCGPEQNNSRLSKLHESHKSHMLAEPDDTLEPCGSGSFVCYSEGEKLHSDGELSKKISECLSPNESNLSEKIDSAWTGTDQPQANAAPVVSIQRSNQHDSPPFGRLTQPMRVHSFDSAVRVHERIRKVLPSSLHLSTLRSFHASGDYGNMVRDPVSNILQSFFQMLPWETQKLNLILSSTPSFISSVSCIAEGARLLLSQTYHGDRVIAVYDNDYSSIISYALSSKEYEDWVSGKSDLPECSWIARERSKEDLATSSFSAWGGNLDLDYINYGSYGSEDVPSSVVGSLLRDSKRSIHLQISFGDDSVGAGGKVNFSVTCYFAKQFESLRKKCCPDEIDFVRSLSRCRRWSAQGGKSNVYFAKSLDERFIIKQVTKTELESFEEFAPQYFKYLMDALNSGGPTCLAKILGIYQVTVKYPKGGKETKIDLMVMENLFYKRNISRVYDLKGSERSRYNPDTTGTNKVMLDMNLLEALRTKPIFLGSRAKRRLERAVWNDTSFLASVDVMDYSLLVGVDDERKELVLGIIDFMRQYTWDKHLETWVKASGILGGPKNAAPTIVSPKQYKKRFRKAMTTYFLTLPEQWLS 1748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02241 1748 SMART PIPK_2 1451 1740 IPR002498 GO:0016307|GO:0046488
Spst3g02241 1748 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 37 102 IPR017455 -
Spst3g02241 1748 Pfam TCP-1/cpn60 chaperonin family 410 658 IPR002423 GO:0005524
Spst3g02241 1748 CDD Fab1_TCP 390 662 - -
Spst3g02241 1748 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1515 1681 IPR002498 GO:0016307|GO:0046488
Spst3g02241 1748 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase isoform X1 455 628 - -
Spst3g02241 1748 Gene3D GroEL 455 628 IPR027409 -
Spst3g02241 1748 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1452 1596 IPR027484 -
Spst3g02241 1748 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1418 1739 IPR002498 GO:0016307|GO:0046488
Spst3g02241 1748 FunFam Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C 1427 1596 - -
Spst3g02241 1748 MobiDBLite consensus disorder prediction 173 190 - -
Spst3g02241 1748 MobiDBLite consensus disorder prediction 116 135 - -
Spst3g02241 1748 MobiDBLite consensus disorder prediction 233 272 - -
Spst3g02241 1748 SUPERFAMILY SAICAR synthase-like 1471 1739 - -
Spst3g02241 1748 MobiDBLite consensus disorder prediction 173 202 - -
Spst3g02241 1748 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 30 1746 - -
Spst3g02241 1748 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase FAB1 1598 1740 - -
Spst3g02241 1748 CDD PIPKc_PIKfyve 1476 1739 IPR044769 GO:0000285
Spst3g02241 1748 SUPERFAMILY GroEL apical domain-like 456 628 IPR027409 -
Spst3g02241 1748 Gene3D - 1597 1740 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02241 Spst-Chr3 64813984 64820752 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02241 1 1748 Acyl Lipid Metabolism Gene Families AT1G71010 53.690 0.0 1691
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02241 3 64813984 64820752 Spst3g02241 3 64813984 64820752 ECH
Spst3g02808 3 77653205 77662594 Spst3g02241 3 64813984 64820752 PCT