Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02185 ATGAAGTTTCCATTGCCTTTTCCCCTCGCAGTATTCGACACAGTACGTAGTGATGGACGTTATGGTAAAGCAGAGAGAGAGAAGTTGCTACGTGTGGTAGTGTGTATGGAGATCATTGCTCTCTTCTTTTGCATTTTCCTCTTCTTCTCATCCCTTCTTTCCTATCCATTAATCAAGAAACACAAGAAACCTCAACACATAACTAAGCCTAAGCTTCCCCCTGGCTCAATGGGTTGGCCTTACATAGGAGAGACCCTTCAACTCTATTCTCAGGACCCTAATATCTTCTTTGCTTCTAAGCAAAAAAGATATGGAGAAATTTTTAAGACACACATACTAGGTTGTCCATGCGTGATGCTGGCGAGCCCCGAGGCTGCACGTTTTGTGTTGGTGACTCATGCTCACTTGTTCAAGCCTACATACCCCAAATGTAAAGAGAAGCTGATAGGCCCTTCTGCATTGTTCTTTCACCAAGGAGACTACCACACTCGCATCAGGAAGCTGGTGCAAACCTCTCTTTCTCCCGAAACCATCAGAAAACTCATCCCAGACATCGAAACTGAGGTTGTTTCCTCCTTGGAATCGTGGGTTTCCGCTGGACAAGTCATTAACGCTTTCCAGGAAATGAAAAAGTTCTCTTTCAATATCGGCATCCTCTCTGTCTTTGGTCATTTGGAACGCAAATATAGAGACCAACTTAAGGAAAACTACTGCATAGTAGAAAAAGGCTACAATTCTTTTCCAAACAGGATACCTGGAACTGCATACTCCAAAGCACTCTTGGCAAGGAGGAGAATCAGAGAGATTATAAGTGAGATCATTTGTAAGAGAAAGGAACAGAGATTGCTGGGAAAGGATCTGTTAGGCCACCTGCTGAACTACAAGGATGAAAAAAGACAAATGCTAAGTGACGACCAAATTGCTGATAATGTAATCGGGGTACTATTTGCAGCTCAGGATACTACAGCAAGTGTTCTAACCTGGATTCTCAAGTATCTTCATGATGACCCGAAACTTCTTGAAGCAATAAAAGCAGAGCAAATGGCAATACATGAAGCTAATGAAGAAGGAAAGATGCCATTGACATGGGGTCAGACCAGAAATATGTCAATTACTCATAGGGTGATTTTGGAAAGCCTTAGGATGGCAAGTATCATATCATTTACTTTTAGAGAAGCTGTGGTTGATGTGGTATACAAAGGATATCTTATTCCCAAGGGTTGGAAAGTCATGCCACTGTTCAGGAACATCCATCATAATCCAGAATTCCACCCTTCTCCTCACAATTTTGACCCATCAAGGTTTGAGGTTTCTCCAAAGCCCAATACTTTTATGCCATTTGGCAACGGAGTGCATTCTTGTCCTGGAAATGAGCTTGCCAAACTGAACATGTTCATTTTGATTCATCATCTAGTGACAAAATATAGGTGGGAAGTGGTGGGATATGAGAACGGAATCCAATGTAGCCCATTCCCAGTTCCTCTACATGGTCTACCTACAAGATTTTGGACAAACGAATAG 1521 0.4227 MKFPLPFPLAVFDTVRSDGRYGKAEREKLLRVVVCMEIIALFFCIFLFFSSLLSYPLIKKHKKPQHITKPKLPPGSMGWPYIGETLQLYSQDPNIFFASKQKRYGEIFKTHILGCPCVMLASPEAARFVLVTHAHLFKPTYPKCKEKLIGPSALFFHQGDYHTRIRKLVQTSLSPETIRKLIPDIETEVVSSLESWVSAGQVINAFQEMKKFSFNIGILSVFGHLERKYRDQLKENYCIVEKGYNSFPNRIPGTAYSKALLARRRIREIISEIICKRKEQRLLGKDLLGHLLNYKDEKRQMLSDDQIADNVIGVLFAAQDTTASVLTWILKYLHDDPKLLEAIKAEQMAIHEANEEGKMPLTWGQTRNMSITHRVILESLRMASIISFTFREAVVDVVYKGYLIPKGWKVMPLFRNIHHNPEFHPSPHNFDPSRFEVSPKPNTFMPFGNGVHSCPGNELAKLNMFILIHHLVTKYRWEVVGYENGIQCSPFPVPLHGLPTRFWTNE 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02185 506 Pfam Cytochrome P450 73 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02185 506 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02185 506 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02185 506 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02185 506 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02185 506 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02185 506 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02185 506 PRINTS E-class P450 group I signature 101 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02185 506 FunFam Abscisic acid 8 62 504 - -
Spst3g02185 506 Gene3D Cytochrome P450 61 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02185 506 PANTHER CYTOCHROME P450 26 70 492 - -
Spst3g02185 506 CDD CYP90-like 101 501 - -
Spst3g02185 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Spst3g02185 506 SUPERFAMILY Cytochrome P450 67 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02185 506 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02185 506 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02185 506 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02185 506 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02185 Spst-Chr3 61028346 61031499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02185 47 502 Cytochrome P450 AT3G19270 71.272 0.0 687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02185 3 61028346 61031499 Spst3g02185 3 61028346 61031499 ECH
Spst8g02158 8 30841212 30846807 Spst3g02185 3 61028346 61031499 ECH