Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01940 ATGGAGAACTGCAGAGAAAACGCAACGGTGCTGAAGGAAGATTTGGAGAAGTGTGGAAGCTTTAACATACTCTCAAAAGACAATGGTGTTCCTGTGGTGGCATTTTGTCTGAAAGACAGAAGCCAGTACGATGAGTACAAGATATCAGAGATGTTGCGCCGCCACGGTTGGATCGTGCCAGCTTATCCAATGCCACCTGCTGCTCAACACGTCAATGTGCTCCGTGTGGTGATAAGGGCTGAGTTTTCGCGCACCCTTGCTCAACGCCTTGTGTTTGACATACACAATGTGTTGCATGACCTTGAAAAGATGCATCCCCCCATAATAGCCACTAACATTATGGAAGAGAAGAAGGGCTTGGTTGATTGTGAAGTCATGAAAACTGCATTGGATGCACACAAGGAAGTCATTGCTCAACAATCCAACAAGCGTCAGAAAATCATGGCTGCCTGA 453 0.4658 MENCRENATVLKEDLEKCGSFNILSKDNGVPVVAFCLKDRSQYDEYKISEMLRRHGWIVPAYPMPPAAQHVNVLRVVIRAEFSRTLAQRLVFDIHNVLHDLEKMHPPIIATNIMEEKKGLVDCEVMKTALDAHKEVIAQQSNKRQKIMAA 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01940 150 PANTHER GLUTAMATE DECARBOXYLASE 1 143 IPR010107 GO:0004351|GO:0006536|GO:0030170
Spst3g01940 150 FunFam Glutamate decarboxylase 18 105 - -
Spst3g01940 150 SUPERFAMILY PLP-dependent transferases 1 103 IPR015424 -
Spst3g01940 150 Gene3D - 18 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01940 Spst-Chr3 45874061 45874513 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01940 1 117 Calmodulin-binding Proteins AT1G65960 62.400 1.56e-45 150
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01940 3 45874061 45874513 Spst3g01940 3 45874061 45874513 ECH