Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01939 ATGGTTTTTCCAAAACCTGCTTCCGAGTCTGACCTCTTTCTTCATTCCAATTTTGCTTCTCGCTATGCTAGGGAATCTCTTCCCAGGTTTAGCATGCCTGAGGACTCCATGTCTAAGGAGGCTGCCTACCAGAACATTCATGATGAGTTACAGCTTGATGCCATTCCGAAGCTGAACTTGGCTTCTTTCGTGACCACTTCCATGGAGGAAGAGTGCAACAAACTCATCATGGAATCCATCAACAAGAACTATGTGGACATGGACGAATATCCTATCACCACTGATCTTCACAATCGGTGCGTGAATATGATAGCACGATTATTCCACGCTGAAATAGAAGAAGATGGGAATGCAGTTGGAGCAGGAACTGTGGGATCATCAGAGGCCATAATGCTGGCAGGGCTTGCATTCAAGAAGAAGTGGCAGAACAAGCGGAAGGCAGAGGTGGAGGTGAGAGAAGGGTACTACGTCATGGACCCTGCTAAAGCAGTTGAATTGGTTGATGAGAACACTATTTGTGTGGCTGCAATCTTGGGTTCAACTTACAATGGAGAGTTCGAAGATGTGAAGCTCCTCAATGATCTACTACTACAAAAAAACAAGCAAACTGGCTGGGATACGCCTATTCATGTGGATGCTGCTAGTGGTGGTTTTATTGCTCCTTTCCTTTATCCAGAGCTAGAGTGGGATTTCAGACTCCCATTGGTGAAGAGCATTAATGTGAGTGGCCACAAATATGGACTTGTTTATGCTGGTATTGGTTGGGTTATTTGGAGGAGCAAGGAGGACTTGCCAGAAGACCTTGTCTTCCATATTAATTACCTTGGAGCTGACCAACCCACCTTCACCCTCAATTTCTCTAAAGGTTCCAGTCAGATCATAGCTCAATATTATCAGCTAATTCGTCTTGGCCAAGAGGTGAGCTCATATAGTAGGATTTACGACCCCTTTCCTTCCAACAACCTAACTAATACAACAAAATCAATTTTATTGGTCTAA 999 0.4424 MVFPKPASESDLFLHSNFASRYARESLPRFSMPEDSMSKEAAYQNIHDELQLDAIPKLNLASFVTTSMEEECNKLIMESINKNYVDMDEYPITTDLHNRCVNMIARLFHAEIEEDGNAVGAGTVGSSEAIMLAGLAFKKKWQNKRKAEVEVREGYYVMDPAKAVELVDENTICVAAILGSTYNGEFEDVKLLNDLLLQKNKQTGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPEDLVFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGQEVSSYSRIYDPFPSNNLTNTTKSILLV 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01939 332 SUPERFAMILY PLP-dependent transferases 15 306 IPR015424 -
Spst3g01939 332 Gene3D - 1 65 - -
Spst3g01939 332 Gene3D - 66 315 IPR015421 GO:0003824
Spst3g01939 332 Pfam Pyridoxal-dependent decarboxylase conserved domain 148 306 IPR002129 GO:0016830|GO:0019752|GO:0030170
Spst3g01939 332 FunFam Glutamate decarboxylase 4 65 - -
Spst3g01939 332 PANTHER GLUTAMATE DECARBOXYLASE 148 315 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01939 Spst-Chr3 45872306 45873936 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01939 1 306 Calmodulin-binding Proteins AT5G17330 74.852 0.0 520
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01939 3 45872306 45873936 Spst3g01939 3 45872306 45873936 ECH