Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01427 ATGGTGGAGATTCAAGAACAAATCAACCCCTTTGATGAAGAAGAAAATGAAGACAAGGAAGAAGAAGAAGATATCGACTATGATCAGCTTAAGAAGAGAATGTGGAAGGATCGGATCCTGTTGCAGAAGCTAAAGGAGAAACGCCCCAAAGAAGAGCCAGACCAAGAAGCAAAAGAAGAAGCATCCAGGCTGAAGAAGATGTCAAGAGCACAAGATGCAATCCTCAAATACATGGTGAAGATTATGGAAGTTTGCAATGCTCAAGGTTTTGTGTATGGGATTATCCCCGAGAAGGGTAAGCCAATGACTGGCTCTTCTGACAGCTTGCGTGAGTGGTGGAAAGAAAAGGTCAGATTTGATCAAACTGCTCCAACTGCCATTGCAAAATTCATGCCACTCCTTGAAATGGATGACATGGATCCAACTTCCTATATACATCTCCTTAATGACTTGCAAGACACTACTTTGAGTTCACTTCTTTCTGCTCTCATGCAACATTGTATACCTCCCCAAAGAAGATTCCCTCTTGAGAGAGGCTTGCCTCCACCGTGGTGGCCAACAGGGACAGAAACTTGGTCGGGTGAACAAGGCCTTTTGGCCCAAGATCATGGCCCACCTCCTTATAGGAAGCCCCATGATCTCAAAAAGGTTTGGAAAGTGTCTCTCTTGGCGGCGGTAATCAAACACATATCTCCTAATTTGGATAAGCTTAGAAGGTTGGTGACTCACTCCAAAACTTTGCAAGACAAGATGACAGCCAAGGACACAGCAACTTGGTCCAAGGTTATGAACCAAGAAGAAGCTCTGTTGCAACTAACCAACAAGTGCCTCAGAATCTCTCTATCAAAGGAAGATGAAAATGAATGTGAAAGCTCCACTAGTACTTCCCACGAAGGGAGTTGTGTAGCTGAGTTGAATGATGACTTCAATTTAGGTGGCATCATTGAGAAAAGGAAGAGTATGATTGACTTAGATGGTACTATTGATAAGCTATATGCTTGTCAATACTATCAGTGTCCACAAAGTGAAACAGGTATGGGATTTCCAGACAAAAACTCAAGGATGAACCATGAGTCCAGTTGTACTTACGGCACAAATCAGAGCCCAGCTCTCCTTCATGATCAAGTGTCCAATGACTCACAAATTACATTCGTGAATGATTGGATGAATATGGAGGTAGCAAGAGCTAATCAGAATAATAATGATCATTTTGGACATCTAAATGATCAACGGAGAGATATTTCAGGACAGTCACCAGAAGATTATGGAGGCTTATGGCTAAATTCCCTTGAAGATCTTGAATCGCACGCTGCACTGGATCAGATGGACATGCACTTGAGTCAAAATCCGGAGCAAGATACACCACAAGGCCAAGAAATAACCTCAATTTGGGACTTAACCTACAAATAG 1410 0.4262 MVEIQEQINPFDEEENEDKEEEEDIDYDQLKKRMWKDRILLQKLKEKRPKEEPDQEAKEEASRLKKMSRAQDAILKYMVKIMEVCNAQGFVYGIIPEKGKPMTGSSDSLREWWKEKVRFDQTAPTAIAKFMPLLEMDDMDPTSYIHLLNDLQDTTLSSLLSALMQHCIPPQRRFPLERGLPPPWWPTGTETWSGEQGLLAQDHGPPPYRKPHDLKKVWKVSLLAAVIKHISPNLDKLRRLVTHSKTLQDKMTAKDTATWSKVMNQEEALLQLTNKCLRISLSKEDENECESSTSTSHEGSCVAELNDDFNLGGIIEKRKSMIDLDGTIDKLYACQYYQCPQSETGMGFPDKNSRMNHESSCTYGTNQSPALLHDQVSNDSQITFVNDWMNMEVARANQNNNDHFGHLNDQRRDISGQSPEDYGGLWLNSLEDLESHAALDQMDMHLSQNPEQDTPQGQEITSIWDLTYK 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01427 469 Gene3D - 138 276 IPR023278 GO:0003700|GO:0005634
Spst3g01427 469 Gene3D - 56 132 IPR023278 GO:0003700|GO:0005634
Spst3g01427 469 Pfam Ethylene insensitive 3 29 267 IPR047091 GO:0003700
Spst3g01427 469 MobiDBLite consensus disorder prediction 45 65 - -
Spst3g01427 469 MobiDBLite consensus disorder prediction 1 27 - -
Spst3g01427 469 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 12 397 IPR006957 GO:0003700|GO:0005634
Spst3g01427 469 SUPERFAMILY DNA-binding domain of EIN3-like 145 270 IPR023278 GO:0003700|GO:0005634
Spst3g01427 469 MobiDBLite consensus disorder prediction 8 24 - -
Spst3g01427 469 FunFam Ethylene insensitive 3-like 1 139 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01427 Spst-Chr3 17752009 17753418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01427 1 370 EIL Transcription Factor Family AT5G10120 54.167 1.18e-131 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Spst3g01427 EIN3 5.7e-112 No_clan