Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00778 ATGACAATGAGAACCCAACGCCTTCACCTTCACCAACTCGTCCTCTCTCTCTTCCTCTTCGCAGCCGCATTTTCTCCGGCGGTCGCGGCCGCAGACGACGCCTCAGCCCCTGCGGCGGACGACAGCGACACCGATTTCATCCGCTCCAGCTGCAACACCACACTCTACCCTGACGTGTGCTTCACCTCCCTCTCCCGCTACGCCAATGCGGTGCAGCAGAATCCCGGCCAGCTTGCGCGCGTGGCCATCGGCGTCAGTCTCTCCAAGGCCCGCCGCGTCGCCTCTTACGTCTCCAACCTCACGCACGACGCCGACTACGGCGCGAGCGGCTCGCGCGCAGCGCTGGCGCTGCACGACTGCTTCACGAACCTGGGCGACGCCGTGGACGAAATCCGCGGGTCGCTTAAGCAGATGCGGCAGATTGGCGCTGCCGGCGAGGGCGCCGGGTCGTTCCTCTTCCAGATGAGCAACGTGCAAACGTGGATGAGCGCCGCCCTCACCGACGAGGAGACCTGTACGGACGGATTCCAGGACGTAGCGGAATGTCCCGTGAAAGCGGATGTATGCGATCGCGTCACCAAGGTCAAGAAGTTCACCAGCAACGCTTTGGCCCTCGTCAACTCCTACGCCAGCAAGGGAATGCCGTGA 648 0.6358 MTMRTQRLHLHQLVLSLFLFAAAFSPAVAAADDASAPAADDSDTDFIRSSCNTTLYPDVCFTSLSRYANAVQQNPGQLARVAIGVSLSKARRVASYVSNLTHDADYGASGSRAALALHDCFTNLGDAVDEIRGSLKQMRQIGAAGEGAGSFLFQMSNVQTWMSAALTDEETCTDGFQDVAECPVKADVCDRVTKVKKFTSNALALVNSYASKGMP 215
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00778 215 Pfam Plant invertase/pectin methylesterase inhibitor 45 205 IPR006501 GO:0004857
Spst3g00778 215 CDD PMEI-like_3 49 211 - -
Spst3g00778 215 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 209 IPR035513 -
Spst3g00778 215 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 209 IPR035513 -
Spst3g00778 215 PANTHER PECTINESTERASE INHIBITOR-LIKE 14 205 - -
Spst3g00778 215 FunFam Pectin methylesterase inhibitor 1 42 209 - -
Spst3g00778 215 NCBIfam pectinesterase inhibitor domain 16 209 IPR006501 GO:0004857
Spst3g00778 215 SMART PMEI_2 42 205 IPR006501 GO:0004857
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Spst3g00778 Spst-Chr3 11302059 11302706 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00778 13 205 Carbohydrate Esterase AT5G53370 25.641 1.43e-12 64.3
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00778 3 11302059 11302706 Spst3g00778 3 11302059 11302706 ECH