Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst3g00778 | ATGACAATGAGAACCCAACGCCTTCACCTTCACCAACTCGTCCTCTCTCTCTTCCTCTTCGCAGCCGCATTTTCTCCGGCGGTCGCGGCCGCAGACGACGCCTCAGCCCCTGCGGCGGACGACAGCGACACCGATTTCATCCGCTCCAGCTGCAACACCACACTCTACCCTGACGTGTGCTTCACCTCCCTCTCCCGCTACGCCAATGCGGTGCAGCAGAATCCCGGCCAGCTTGCGCGCGTGGCCATCGGCGTCAGTCTCTCCAAGGCCCGCCGCGTCGCCTCTTACGTCTCCAACCTCACGCACGACGCCGACTACGGCGCGAGCGGCTCGCGCGCAGCGCTGGCGCTGCACGACTGCTTCACGAACCTGGGCGACGCCGTGGACGAAATCCGCGGGTCGCTTAAGCAGATGCGGCAGATTGGCGCTGCCGGCGAGGGCGCCGGGTCGTTCCTCTTCCAGATGAGCAACGTGCAAACGTGGATGAGCGCCGCCCTCACCGACGAGGAGACCTGTACGGACGGATTCCAGGACGTAGCGGAATGTCCCGTGAAAGCGGATGTATGCGATCGCGTCACCAAGGTCAAGAAGTTCACCAGCAACGCTTTGGCCCTCGTCAACTCCTACGCCAGCAAGGGAATGCCGTGA | 648 | 0.6358 | MTMRTQRLHLHQLVLSLFLFAAAFSPAVAAADDASAPAADDSDTDFIRSSCNTTLYPDVCFTSLSRYANAVQQNPGQLARVAIGVSLSKARRVASYVSNLTHDADYGASGSRAALALHDCFTNLGDAVDEIRGSLKQMRQIGAAGEGAGSFLFQMSNVQTWMSAALTDEETCTDGFQDVAECPVKADVCDRVTKVKKFTSNALALVNSYASKGMP | 215 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst3g00778 | 215 | Pfam | Plant invertase/pectin methylesterase inhibitor | 45 | 205 | IPR006501 | GO:0004857 | |
Spst3g00778 | 215 | CDD | PMEI-like_3 | 49 | 211 | - | - | |
Spst3g00778 | 215 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 41 | 209 | IPR035513 | - | |
Spst3g00778 | 215 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 45 | 209 | IPR035513 | - | |
Spst3g00778 | 215 | PANTHER | PECTINESTERASE INHIBITOR-LIKE | 14 | 205 | - | - | |
Spst3g00778 | 215 | FunFam | Pectin methylesterase inhibitor 1 | 42 | 209 | - | - | |
Spst3g00778 | 215 | NCBIfam | pectinesterase inhibitor domain | 16 | 209 | IPR006501 | GO:0004857 | |
Spst3g00778 | 215 | SMART | PMEI_2 | 42 | 205 | IPR006501 | GO:0004857 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst3g00778 | Spst-Chr3 | 11302059 | 11302706 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst3g00778 | 13 | 205 | Carbohydrate Esterase | AT5G53370 | 25.641 | 1.43e-12 | 64.3 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Spst3g00778 | 3 | 11302059 | 11302706 | Spst3g00778 | 3 | 11302059 | 11302706 | ECH |