Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00696 ATGAGAATTGGGAGAAAGGAAGTGGTGGAAGAAGTGAAGAGGCAGCTATGGTTAGCAGTGCCTCTCTTCTCAGTTGGAATTCTGCAATACATTCTGCAAACAATCTCTGTGATATTTGTTGGGCGTCTTGGTACCCTCCCTCTTGCTGGTGCAACCATGGCCACTTCCTTTGCATCAGTCACTGGCTTCAACTTACTGATGGGGTTAGCTACTGCACTGGACACATTTTGTGGTCAATCAAATGGGGCAGGACAGTACTATATGCTTGGCATACACATGCAGAGATCCATGTTTGTTGTTTTAACTATGAGTGTGTTCCTTGCCATAATCTGGGCCAACATAGAACCAATTCTAAAGGCTATGCATCAGGACAAGGCCATATGCAAGGAAGCTGGCTCATATGCCTTATACATGATCCCAAGTTTATTTGCTTACGGTCTTCTTCAGTGCATTCTCAAGTTCTTGCAAACCCAAAACATTGTGTTCCCAATGGTGGTAACTTCTGGAATTGCAGCTGTGCTGCATATCTTTTTGTGTTGGCTATTGGTTTTCAAGTCAAGGCTTGGAAGCAGAGGAGCAGCCTTGGCCAATTCAATATCTTACTGGGTAAATGCAATCTTGATTTTCCTGTATGTGAGGTTCTCTTCTTCATGCAAACAATCTTGGACAGGCTTTTCAAAGATGGCCTTCCACAATCTACTAGAATTCCTTAAACTCGCTGTTCCTTCAGCTCTTATGCTCTGGAAATTATGGGTGCAATTTTTAGCGCGTTATGATTGCGACGAGTCTAAAATATTGATGTTGCGGTCGAAATTCTTGAAAGTGTGGACATTTGAACTAATGGTCCTCATGTCTGGTCTTCTTCCTAACCCAACATTAGAAACTTCAGTGCTTTCAATATGGTTTGTGTCTGAACTATACCCAAACACACAACCAAGAATATTCTTTGCTTTTATTGTACAGCAAAACCTTCATGCGGGTATAAAAAAATCAATTTCCTATCTTTCCAGCCTTAATACATTTGGTCTAGCTTGGATGATCCCTTTTGGATTCAGTGGCGCAGTAAGTATTCGAGTCTCAAATGAACTAGGGGGTGGAAATCCAGAAGCTGCAAGTGTAGCAGTTAGGGTGGTGTTGTCCATAGCCTTAATTGAAGGGGTGATTTTAGTTTCAGCCATGATGCTACTGCGGCATGTGTGGGGGCATGTTTATAGTGATGACAAAGAGGTAATCAGATATGTGTCCGCTGTGATGCCAACTTTGGCCGTTTCTAGCTTTCTAGATGGGATCCAAAGTGCATTTTCAGAATCAAATTTGAGTCACCGGTTATTTGTTACACTTCCACACATTCCAGCGAATCCACAAAAATCAGGAATTCTTGCAGGATGTGGGTGGCAAAAGATCGGTGCCTGTGTGAATCTGGCCTCATTTTATCTTGTTGGGGTTCCTTGTGCTGTTGTGTTAGGATTCGTTGTACACATGAAATCCAAGGGCCTTTGGTTGGGGATAATTTCAGCATTTGTTGTGCAAGTGTTGTTTTACATAGTCATTGCTTTGCGAACTAATTGGGAGGAACAAGCAAGGAAAGCTCAAAGCAGAGTTGAACGCTCAGCCACCTCGCTGACTACTAGAGACAGCTAA 1641 0.4272 MRIGRKEVVEEVKRQLWLAVPLFSVGILQYILQTISVIFVGRLGTLPLAGATMATSFASVTGFNLLMGLATALDTFCGQSNGAGQYYMLGIHMQRSMFVVLTMSVFLAIIWANIEPILKAMHQDKAICKEAGSYALYMIPSLFAYGLLQCILKFLQTQNIVFPMVVTSGIAAVLHIFLCWLLVFKSRLGSRGAALANSISYWVNAILIFLYVRFSSSCKQSWTGFSKMAFHNLLEFLKLAVPSALMLWKLWVQFLARYDCDESKILMLRSKFLKVWTFELMVLMSGLLPNPTLETSVLSIWFVSELYPNTQPRIFFAFIVQQNLHAGIKKSISYLSSLNTFGLAWMIPFGFSGAVSIRVSNELGGGNPEAASVAVRVVLSIALIEGVILVSAMMLLRHVWGHVYSDDKEVIRYVSAVMPTLAVSSFLDGIQSAFSESNLSHRLFVTLPHIPANPQKSGILAGCGWQKIGACVNLASFYLVGVPCAVVLGFVVHMKSKGLWLGIISAFVVQVLFYIVIALRTNWEEQARKAQSRVERSATSLTTRDS 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00696 546 CDD MATE_eukaryotic 11 529 IPR045069 GO:0042910|GO:1990961
Spst3g00696 546 PANTHER MULTIDRUG RESISTANCE PROTEIN 5 523 - -
Spst3g00696 546 Pfam MatE 337 435 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst3g00696 546 Pfam MatE 21 181 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst3g00696 546 NCBIfam MATE family efflux transporter 21 253 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00696 Spst-Chr3 10388206 10391556 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g00431 4 5633857 5634868 Spst3g00696 3 10388206 10391556 ECH
Spst3g00696 3 10388206 10391556 Spst3g00696 3 10388206 10391556 ECH
Spst3g00696 3 10388206 10391556 Spst4g02810 4 67818925 67823372 PCT
Spst4g02812 4 67829690 67833982 Spst3g00696 3 10388206 10391556 PCT