Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00658 ATGGAAGATATTCTCGGCCTTTTAAGAATTCACATCAAGCGTGGTTGCAACCTCGCCATTCGTGATGTCAGCACCAGCGATCCATACGTGGTTGTTAAGATGGACAAGCAGAAGCTGAAGACTCGTGTGATTAAGAAGGATATTAACCCTGAGTGGAATGAAGATCTTACTCTTTCTGTAACAGATCCCACTACTCCACTTCAACTGACTGTCTTTGATCATGACACTTTCACCATGGATGACAAAATGGGAGATGCAGAAGTTGACATCGCACCATACATAGAAGCCTTAAAGATGAACTTAGATGAGCTTCCCAGTGGAACCATTGTCACAAGAATACAACCATGCAGGCAAAACTGTCTAGCGGAGGAAAGCTGCGTGGTTTATGAGGATGGCAAACTTGTCCAAAACATCGTTCTAAGACTGCGACACGTTGAATGCGGTGAGGTGGAAATTCAATTGGAATGGATTAATCTTCCTGGCGCCAAGGGTCTTTGA 498 0.4418 MEDILGLLRIHIKRGCNLAIRDVSTSDPYVVVKMDKQKLKTRVIKKDINPEWNEDLTLSVTDPTTPLQLTVFDHDTFTMDDKMGDAEVDIAPYIEALKMNLDELPSGTIVTRIQPCRQNCLAEESCVVYEDGKLVQNIVLRLRHVECGEVEIQLEWINLPGAKGL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00658 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 4 163 IPR044562 -
Spst3g00658 165 SMART C2_3c 7 102 IPR000008 -
Spst3g00658 165 Gene3D C2 domain 3 163 IPR035892 -
Spst3g00658 165 PRINTS C2 domain signature 22 34 IPR000008 -
Spst3g00658 165 PRINTS C2 domain signature 46 59 IPR000008 -
Spst3g00658 165 PRINTS C2 domain signature 67 75 IPR000008 -
Spst3g00658 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 128 IPR035892 -
Spst3g00658 165 CDD C2_ArfGAP 5 148 - -
Spst3g00658 165 Pfam C2 domain 6 92 IPR000008 -
Spst3g00658 165 ProSiteProfiles C2 domain profile. 1 106 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00658 Spst-Chr3 10034620 10035302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00658 38 165 C2H2 Transcription Factor Family AT1G70790 57.692 5.66e-52 161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00658 3 10034620 10035302 Spst4g02832 4 67990310 67992324 PCT