Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00182 ATGGCGAGAAACTGGTTGTTTCGATCTCTGACCCTTCGACATGCGATAAAGAATAGGGTTCGCCCAATCCTCTTCCACGCTCACCACCGCTTTCTCTCACTCCCATCCAAACCCTCTCTCTTCGCCACCGCCATCGCCTCCTCTCAGCTCTCTTTCCTCCCATCCTTCCACCACTCCCGTTCCCTCTCCTCCGCCGCAGGTCCTTCCGACGTTGTCCTTGTTAATTCAGAGGAAGAGTTCAACAAAATCCTTACCAAAGTCAGAGATGACTCGTCGCACGCTATCTTCTATTTCACTGCGGTTTGGTGTGGACCTTGCAGGTTTATCACTCCTATAGTTGGGGAGCTCAGTAAGAAGTATCCTCATGTGACAACATACAAGATTGACATTGATCAGGAAGCAATTCAAGGCACGTTGGGCAAATTGCAGATTACATCTGTGCCTACACTTCATTTCTTTCAGAATGGGAAAAAAGTGGATGAGCTTATAGGTGCTGATGTCACGCGATTGAACAATATCACAGAGAAACTGTTCAAGTAA 540 0.4759 MARNWLFRSLTLRHAIKNRVRPILFHAHHRFLSLPSKPSLFATAIASSQLSFLPSFHHSRSLSSAAGPSDVVLVNSEEEFNKILTKVRDDSSHAIFYFTAVWCGPCRFITPIVGELSKKYPHVTTYKIDIDQEAIQGTLGKLQITSVPTLHFFQNGKKVDELIGADVTRLNNITEKLFK 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00182 179 FunFam Thioredoxin 68 179 - -
Spst3g00182 179 ProSiteProfiles Thioredoxin domain profile. 47 179 IPR013766 -
Spst3g00182 179 PANTHER THIOREDOXIN-LIKE PROTEIN 1 71 176 - -
Spst3g00182 179 SUPERFAMILY Thioredoxin-like 61 166 IPR036249 -
Spst3g00182 179 Gene3D Glutaredoxin 67 179 - -
Spst3g00182 179 Pfam Thioredoxin 72 167 IPR013766 -
Spst3g00182 179 CDD TRX_family 78 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00182 Spst-Chr3 3307801 3310215 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00182 3 3307801 3310215 Spst3g00182 3 3307801 3310215 ECH