Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00020 ATGGAAGGTTTTCACCCTTCTATGACATCTTTTTCGTACACATTTCCCATCGGTGGTGCTGGTAGTAGTACTACTAGCAATCTTACCACTGGCACTTACAGCACTTCTACTCCATGGATGAACAGCAGAATATGGAGCAAGCTCCCTCAAAGGCTTCTTGACCGTGTCATAGCCTTCCTTCCTCCGCCAGCTTTCTTTCGTGCACGTTGTGTTTGCAAGAGATGGTATGCTCTTCTCTTCTCCAACACCTTCCTTGAATTATACCTCCAAGTCTATCCACGCCGTCACTGGTTCATGTTCTTCAAGCACCACAAAACCTGCAAGAGCTACATCTACAAGAACAATAACAACGGTAGTGGTTGTGCACATGGTGCAGCCTCTTCCTGTGAAGAAGGGTACCTCTTTGATCCCTCTGAGATGGCATGGTACCGCATTTCCTTTGCTTTGGTCCCTTCTGGCTTCTCTCCAGCCTCTTCTTCTGCTGGTTTACTTTGTTGGCTTTCTGACGAGGCAGGTCCTAAGACCATGCTTCTGTGCAACCCTTTGGTTGGTTCTCTCACTCAGTTACCTCCCACGTTCAGACCTAGACTCTTCCCTTCCGTTGGCTTAACCATTAGCCCCACCTGCATAGATGTCACTGTTGCTGGGGATGACATGATATCTCCTTATGCAGTGAAGAACTTGACATCTGAAAGCTTTCACATCGATGGAGGAGGGTTTTACTCCTTGTGGGGCACCACCTCTTCTCTGCCTAGGCTTTGCAGCCTTGAATCCGGTCGAATGGTTTATGCTGAAGGGAAGTTTTACTGCATGAATTGTAGCCCTTTTAGCGTGCTGGCTTATGACATCACATCAAACAGTTGGTTTAAAATACAGGCTCCCATGAGGAGGTTCCTCAGGTCTCCGAACCTGGTTGAGTGCAAGGGGAAGTTGCTTCTTGTTGCTGCTGTTGAGAAGAGCAAGCTGAACGTGCCAAAAAGTTTGAGGGTGTGGAGTTTGCAAGCCTGTGGGACAATGTGGGTGGAGTCAGAGAGAATGCCGCAGCAGCTTTATATTCAGTTTGCCGAATTGGAAGTTGGAAACGGGTTTCAATGTGTAGGGCATGGGGATTTTATTGTCATCATGATTCGTGGAACAGACAAAGCATTGCTGTTTGATATATGCAGGAAGAGGTGGCAGTGGATTCCACCTTGTCCTTACACTGCACATGATGACTTTGAATTGCATGTTTTTGCATATGAACCTAGACTCGCCACTCCAGTCACTGGCCTCCTTGATCAATTGACACTTCCCTTCCAGAGTTTTAGTGCTTAA 1314 0.4718 MEGFHPSMTSFSYTFPIGGAGSSTTSNLTTGTYSTSTPWMNSRIWSKLPQRLLDRVIAFLPPPAFFRARCVCKRWYALLFSNTFLELYLQVYPRRHWFMFFKHHKTCKSYIYKNNNNGSGCAHGAASSCEEGYLFDPSEMAWYRISFALVPSGFSPASSSAGLLCWLSDEAGPKTMLLCNPLVGSLTQLPPTFRPRLFPSVGLTISPTCIDVTVAGDDMISPYAVKNLTSESFHIDGGGFYSLWGTTSSLPRLCSLESGRMVYAEGKFYCMNCSPFSVLAYDITSNSWFKIQAPMRRFLRSPNLVECKGKLLLVAAVEKSKLNVPKSLRVWSLQACGTMWVESERMPQQLYIQFAELEVGNGFQCVGHGDFIVIMIRGTDKALLFDICRKRWQWIPPCPYTAHDDFELHVFAYEPRLATPVTGLLDQLTLPFQSFSA 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00020 437 FunFam protein UNUSUAL FLORAL ORGANS 41 85 - -
Spst3g00020 437 Gene3D - 40 85 - -
Spst3g00020 437 ProSiteProfiles F-box domain profile. 42 91 IPR001810 GO:0005515
Spst3g00020 437 PANTHER BNACNNG10540D PROTEIN 36 419 - -
Spst3g00020 437 SUPERFAMILY F-box domain 38 117 IPR036047 GO:0005515
Spst3g00020 437 SUPERFAMILY Galactose oxidase, central domain 70 401 IPR011043 -
Spst3g00020 437 SMART fbox_2 48 88 IPR001810 GO:0005515
Spst3g00020 437 Pfam F-box domain 45 79 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00020 Spst-Chr3 653660 654973 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00020 3 653660 654973 Spst3g00020 3 653660 654973 ECH