Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02342 ATGGACCACGAGAAAGCCCCTAACTTGGTGGAAGAAAGGATAATGCAGGAAATTGAGATACCCATTGCATCTGAAAGACTTGATGTTCTCCCTATGAAGGCAGATTTATCTTGCAGTTCTGGTTGTCCTTTTTCTGGGCATGAAAACAGTGTTGTGGCATCAATAGAGTCTTCAAAGTCAGCAAAGAAACTTTGTGGACTCATTGTTTTCTATGCTATAGTCATGGTTGTGGAACTTATTGGTGGAATAAAAGCTCACAGCCTAGCTGTTATCAGTGATGCAGCACACTTGCTTTCTGATATTGCTGGGTTCTCTATCTCTCTCTTTGCAGTGTGGGCTTCATGTTGGGAGGCTACACCGCATCAATCTTTCGGATACAATCGTCTCGAGGTTTTGGGGGCTCTTATATCTGTGCAGTTAATTTGGTTGATATCTGGTTTTTTGATATATGAAGCAATTGGTAGAATTTTTGTACAAAATGAGAGTGTGAACGGAAAGCTCATGCTTGCAATTGCAACAGTTGGGTTTGTTCTTAACTTTATCATGGTTGCATGGATTGGTCATGATCATGGTCATCATCATCATCATCACCATCATCATGGTTGTCAAGGCTCTGGTCATGATCATGGGAACGAGGAACCATCTAGAATAACTGATGAGGAGAATGTTAGCCTGGTTTCAAGTAGTCACAATAAAACTAATGTCTTGAACATAAATCTCCAGGGGGCGTATTTGCATGTCATGGCTGATATGATTCAATCTATTGGAGTGATGATTTCTGGAGCCATAATTTGGGCTGAACCTGAGTGGTTTATAGTTGACCTTGTGTGTACTCTTCTATTCTCTGTTTTATCTTTAAGTACTACCTTGCCCATGCTTAGGAATGTTTATGGCATTCTGATGGAAAGGGCACCAAGTGAGATCGATATGAACAAGCTGGAAACTGGCATTAGAAATATCAAGGGAGTACAGGATGTTCATGACTTGCACGTTTGGGCTATAACTACTGGAAAATTTGTTCTATCTTGCCATGTAGTGGCTGAGCCTGGCATAAGTTCTATTGATTTACTAGGCACGGTTAAACATTACTGTGAACAAACATATCAAATACAACATGTAACTATACAAATTGAGTAA 1137 0.4011 MDHEKAPNLVEERIMQEIEIPIASERLDVLPMKADLSCSSGCPFSGHENSVVASIESSKSAKKLCGLIVFYAIVMVVELIGGIKAHSLAVISDAAHLLSDIAGFSISLFAVWASCWEATPHQSFGYNRLEVLGALISVQLIWLISGFLIYEAIGRIFVQNESVNGKLMLAIATVGFVLNFIMVAWIGHDHGHHHHHHHHHGCQGSGHDHGNEEPSRITDEENVSLVSSSHNKTNVLNINLQGAYLHVMADMIQSIGVMISGAIIWAEPEWFIVDLVCTLLFSVLSLSTTLPMLRNVYGILMERAPSEIDMNKLETGIRNIKGVQDVHDLHVWAITTGKFVLSCHVVAEPGISSIDLLGTVKHYCEQTYQIQHVTIQIE 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02342 378 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 304 378 IPR036837 -
Spst2g02342 378 Gene3D Cation efflux protein transmembrane domain 60 300 IPR027469 -
Spst2g02342 378 SUPERFAMILY Cation efflux protein transmembrane domain-like 61 302 IPR027469 -
Spst2g02342 378 Pfam Cation efflux family 68 301 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Spst2g02342 378 NCBIfam cation diffusion facilitator family transporter 62 378 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Spst2g02342 378 MobiDBLite consensus disorder prediction 204 219 - -
Spst2g02342 378 MobiDBLite consensus disorder prediction 196 223 - -
Spst2g02342 378 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 42 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02342 Spst-Chr2 22951502 22952638 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02342 16 378 Inorganic Solute Cotransporters AT2G29410 48.774 6.88e-115 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02342 K14689 - gmx:100777590 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02342 2 22951502 22952638 Spst2g02342 2 22951502 22952638 ECH