Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02314 ATGTTCCATGATTCCTTGGCTCTCCAAGCTGCTGAGAAATCATTCTATGAGGTCATTGGTGAGAAATACCCTTCTTCAATCCAAAACTATCACAACGTGGACAGCCCTGATGATAGTAGCTTCAGTGGTACAACAACTAGCAGTTGTAACTCGGTTGAGTCCCATTGGAATAACGTTGATCTTACTGACTATAAGCCTTCCATATTGCAAACCAATTTTCCCACTGACTTTGTTTTCCAGGCCAGTTCAATCCAATCTTCTATGAACACCACAAGCAACTTCAGCGTTGCGAACAGTGGATTCTTTGCAAGTTCCACTGCGGCCGGATTTTTGGAGCCAACCTTGTTTAGCAAGAGTGAGTCTGTACTGCAATTTGAGAAGGGTGTGGAGGAAGCCAATAAGTTCCTGCCTAAAGGGAATCGTTTGGTTATTGACTTGGAGAACCCCTCTTTCAGGAAGGTTCCTCCTCTACAGGAGGAAATTAAGGCAGAGAAAGATGAAATTTCTGCTGATTCAACAAGAGGAAGGAAGAATCACGAGCGGGAAGATGAAGAAGCAGATTTACAGGATGGGAGAAGCAACAAGCAGTCAGCTGTGTACATTGATGACAGTGAGATATCAGAATTGCTTGATAAGGTTCTGCTGGGCACAAGATGGAGAAATGAGCCAGCCCCTTTGTGTATCTGTTACGCAGACCTTCCTAATGGAGCATCCTTGAGTGCACAGAAGAAATTAGAAGAAACAAACAAGTCTGGTGGTGGGAAGAGCCATGTTAAGAAACAAGGCAACAATAAAGGAGTTGTGGATTTGAGGACATTGTTGATTCTATGTGCACAAGCTGTTTCTTCTGATGATCTTATAACTGCTAATGAGTTGCTGAAGCAGATAAGGCAACATACTTCTCCACTGGGTGATGGAACTCAGAGGCTGGCCCATTGCTTTGCAAATGCTCTTGAAGCACGCTTGGCTGGGACAGGCACTCAGATTTATACCGCTTTATCACATAAAAGAAACTCTGCAGCAGACATGGTGAAAGCTTACCAAATGTATATTTCAGCCTGTCCATTCAAGAAGCTTTCAATAATTTTTGCAAATCATACAATTTTGCAGCTAGCCAAGGAAGTTGAATCTCTTCATATTATAGACTTCGGGATCCGTTATGGCTTCCAGTGGCCAGCTCTTATTTATCGTCTATCAAAACACATTGGTGGGCCTCCCAAGCTGCGGATTACAGGGATAGAGCTCCCACAACCTGGATTCAGGCCAGCAGAGAGAGTCCAAGAGACCGGGCTTCGCCTTGCAAGATATTGTGATCGCTTTAATGTTCCATTTGAGTTCAATGCCATTGCACAGAAATGGGAAACCATCAAAATTGAGGACTTGAAGATTAAGGAAAATGAACTTCTTGTTGTGAATTCTATGTTTAGATTTCAAAATCTACTTGATGAGACAGTTGTGTTGAATAGTCCCCGGGATGCTGTCATAAATTTAATAAGGAAGGCAAATCCCACCATCTTCATACATAGTACTGTCAATGGGAGCTATAATGCTCCATTCTTTGTGACACGGTTCCGGGAGGCCCTTTTCCATTATTCTACATTGTTTGATGTGCTTGATACCAATGTTATTCGACAAGATCCAATGAGGTTAATGTTTGAGAAAGAGTTCTTTGGGCGGCAGGTGATGAATATTTTAGCTTGTGAGGGTTGTGAGAGGGTTGAGAGGCCCCAGACATACAAGCAATGGCAAGTTAGGATCATGAGAGCTGGGTTTAGGCAACTGCCCTTGGATAAACATCTCATCAACAAATTAAGATGCAAGTTGAAAGATGTGTACCACAGTGATTTCATGCTTCTTGAAGATGGCAATTACATGCTCCAAGGTTGGAAGGGCCGCTTAGTTTATGCTTCCTCTTGTTGGGTGCCTGCATAG 1932 0.4301 MFHDSLALQAAEKSFYEVIGEKYPSSIQNYHNVDSPDDSSFSGTTTSSCNSVESHWNNVDLTDYKPSILQTNFPTDFVFQASSIQSSMNTTSNFSVANSGFFASSTAAGFLEPTLFSKSESVLQFEKGVEEANKFLPKGNRLVIDLENPSFRKVPPLQEEIKAEKDEISADSTRGRKNHEREDEEADLQDGRSNKQSAVYIDDSEISELLDKVLLGTRWRNEPAPLCICYADLPNGASLSAQKKLEETNKSGGGKSHVKKQGNNKGVVDLRTLLILCAQAVSSDDLITANELLKQIRQHTSPLGDGTQRLAHCFANALEARLAGTGTQIYTALSHKRNSAADMVKAYQMYISACPFKKLSIIFANHTILQLAKEVESLHIIDFGIRYGFQWPALIYRLSKHIGGPPKLRITGIELPQPGFRPAERVQETGLRLARYCDRFNVPFEFNAIAQKWETIKIEDLKIKENELLVVNSMFRFQNLLDETVVLNSPRDAVINLIRKANPTIFIHSTVNGSYNAPFFVTRFREALFHYSTLFDVLDTNVIRQDPMRLMFEKEFFGRQVMNILACEGCERVERPQTYKQWQVRIMRAGFRQLPLDKHLINKLRCKLKDVYHSDFMLLEDGNYMLQGWKGRLVYASSCWVPA 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02314 643 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 194 634 IPR005202 -
Spst2g02314 643 MobiDBLite consensus disorder prediction 157 191 - -
Spst2g02314 643 MobiDBLite consensus disorder prediction 155 194 - -
Spst2g02314 643 Pfam GRAS domain family 270 640 IPR005202 -
Spst2g02314 643 ProSiteProfiles GRAS family profile. 261 641 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02314 Spst-Chr2 22492154 22494085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02314 1 643 GRAS Transcription Factor Family AT1G07530 54.451 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst2g02314 GRAS 5.6e-113 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02314 2 22492154 22494085 Spst2g02314 2 22492154 22494085 ECH
Spst8g00312 8 2741677 2743311 Spst2g02314 2 22492154 22494085 ECH
Spst5g00414 5 3313822 3315870 Spst2g02314 2 22492154 22494085 PCT