Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02296 ATGGTTTTCTCCTCTATTCCAGTCTTTGTAGATCCTCCCAATTGGCAGCAGCAACCAAACCATCCTCAAGCCAATGGCAGTGATAACACTCAGCTTCTTCCGCCTTTGCCTCCACAGCAGCCTCATGTGGGAGGTTCTGGGGGTTCAATCAGGCCAGGTTCTATGGCTGATCGAGCCAGGCTAGCTAAAATACCTCCTCCTGAACCAGCTCTCAAGTGTCCACGTTGTGAATCCACCAACACTAAATTTTGCTATTTCAACAACTATAGCCTCTCTCAACCACGCCACTTCTGCAAGACTTGTAGGCGCTATTGGACAAGAGGGGGTGCTCTAAGAAACGTTCCTGTGGGTGGAGGGTGCCGCAGGAACAAGAAGAACAAAAGGAGTCGCTCTAAGTCTCCTGCATCATCTGAGAAACAAACACTTTCTGGTTCTTCTGGTGCACTCCCCTCTGGTGGAACCACTCACGAGCTTATAGGCCAGTTGCCACAACCACCAAATCTTCCCTTCATGGCTTCCCTCCAGAACCTGAACCGTTATGCTGTTGGAAACATGGGCCTCGGGTTGCGTGAGATTCACGGACAGAACGATCACATGGGGTTTCAAATTGGTGGCAGTGGTAATCCGTCTGCTGGTGGAGGAATGGATCAGTGGCGCTTGCAGCAAGTTCCTTTCTTGAATGGTTTTGAATCAGCTTCAGCTGGTTCATACCATTTTCAAAATGAAAGTATTGAAACACCTTCTGGTTTGGTTGGAGATTTATCAACGAATTCTAGGGTTTCTCAGATGCCATCAGTTAAAATGGAAGAAAGTGCAGCCTTGAACTTGTCAAGATCACCACTGAACATCTCAGAAAATAACCACTACTATTCATGGACTGATATGTCAGGTCTTTCCTCTTCTTCAGCTAGTCATCTCTTGTAA 924 0.4719 MVFSSIPVFVDPPNWQQQPNHPQANGSDNTQLLPPLPPQQPHVGGSGGSIRPGSMADRARLAKIPPPEPALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKNKRSRSKSPASSEKQTLSGSSGALPSGGTTHELIGQLPQPPNLPFMASLQNLNRYAVGNMGLGLREIHGQNDHMGFQIGGSGNPSAGGGMDQWRLQQVPFLNGFESASAGSYHFQNESIETPSGLVGDLSTNSRVSQMPSVKMEESAALNLSRSPLNISENNHYYSWTDMSGLSSSSASHLL 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02296 307 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 43 230 IPR045174 GO:0003700|GO:0006355
Spst2g02296 307 MobiDBLite consensus disorder prediction 115 164 - -
Spst2g02296 307 Pfam Dof domain, zinc finger 70 125 IPR003851 GO:0003677|GO:0006355
Spst2g02296 307 ProSitePatterns Zinc finger Dof-type signature. 73 109 IPR003851 GO:0003677|GO:0006355
Spst2g02296 307 ProSiteProfiles Zinc finger Dof-type profile. 71 125 IPR003851 GO:0003677|GO:0006355
Spst2g02296 307 MobiDBLite consensus disorder prediction 11 33 - -
Spst2g02296 307 MobiDBLite consensus disorder prediction 11 54 - -
Spst2g02296 307 MobiDBLite consensus disorder prediction 135 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02296 Spst-Chr2 22237773 22238886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02296 38 306 C2C2-Dof Transcription Factor Family AT3G55370 42.140 3.71e-52 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Spst2g02296 zf-Dof 2.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02296 - - gmx:100816635 511.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00581 5 4837977 4838825 Spst2g02296 2 22237773 22238886 PCT
Spst5g00437 5 3433151 3434218 Spst2g02296 2 22237773 22238886 PCT