Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01994 ATGTTGGCCTCCTCACTCCTACCTTCCTCGAGGCTCCACCCTTCGTATTTCGTCCCACCCATCAACGTCGCAGAAACTCACCCGAGAAACAGAGTCGCAATCTTTTCCAAATCCACCTCCAAACTCGCTTTCGTTGCCAGGACCGCCAATAACGCCCATGATGGCGCCGTTGACGCAACCTCTCCGCTGGGCATTGATGAAGTAACAAGTACATGTTCTGACCTCGGTGATGGTTATGTGGCCTTGTTTATTCGTATGTTAGGCCTTGATCGTGATCCTCAGGATAGAGAACAAGCTATAATTGCTCTCTGGAAATATTCACTTGGTGGAAAGAAGTGTATAGACACTATAATGCAATTTCCTGGTTGTATTAATCTCGTTGTGAACCTCCTCAGATCAGAGTCTAGTTCAGCAAGTGAGGCTGCTGCAGGCCTTTTGCGTTCACTATCTTCAGTCAATCTATATAGAAATTCTGTAGCTGATAGTGGAGCAATAGAAGAGATAAACAGATTGCTGAGGCAATCTCCCTTGCCTCCTGAGGTAAAGGAGGAGAGTTTGAGTACATTGTGGAATTTATCTGTTGATGAGAAGCTCTGGATTAAAATTTCAAAGACTGACATTCTGCCTGTAGCTATTAAATACCTTGACGATGAGGATATTAAAGTGAAGGAGGCTGCAGGGGGCATTTTGGCAAATTTAGCATTGAGCCATGTTAACCACAACATTATGGTTGAAGCAGGTGTTATACCAAAATTGGCAAAGTTCTTAACATCTAATCCTGAAGGATCTAAAGTTATTAGGAAGGAAGCAAAGAATGCATTGCTAGAACTTTTTAAGGACAAGGATTATAGAATTCTTGTTATTGAGGAAGGTCTGGTCCCTGTGCCATTAATTGGTGCTGCGGCATATAAGTCATTCACCCCAGGCTTACATTTGTGGCCCACATTACCTGATGGTACAGAAATTGAAAGGACTTCTAGACAGCCATCCAAATATGGAGCTTCAGAATTACTTCTTGGATTAAATATTGATGACAAGAATGCTAACTTAGAGAAAGCAAAGGTCAGTGCAATTGTTGGACGAACTCAACAGCAATTCCTTGCTCGTGTTGGGGCTTTAGAAATGGAAGAAAAGACTATACCTCACTCTGGTTGCTCAAATGATGCGAGGTTTACACTTTTACCTTGGACGGATGGTGTTGCTCGATTAGCACTGATACTAGAACTGGAAGATAAGTCTGCAATAATAAAGGCCGCAGAATCAATTGCAACTGCATCTATCAATGAACATATGCGTATTGCATTCAGGGAGGCAGGAGTAATTAAGCATTTAATAAGGCTTTTGAACTGTGATGATGATGCAGTCCAGTTGGCAGTAATACAAGCTTTGGAAAGGCTGTCTGTTAGCAATATAGTTTGCCGGGTAATCGAAGCCGAAGGGATTTTAGGTCTTTTAGTTAGTATTTTGAAAAGCTCAGGGATAGCTGGAACTATGGTGGAAAAGTCTTTGAGCTTATTATCTCGGATATTAGACCTGAGTAAACAAATGCAATTGAAGTTTTATGATGGACCAGTTAATGGATCTGAAAAGGCATTTAGTGGAGCAAAAAGCGACTGTGTTCCAACTGGGTTTAGTAGCACTGAACAAAGTGTATCAAAAACAAACACAAGGAATGATATACTGGATTCTGTTTTCATTGCACACCTTGTTGAGATTCTGAAGTCCTCTCCTCCCAATTTACAAGAAAAAGCTGCATCGGTGCTTGAGTTTGTGGCATTGACTGACCCAACTCTGGCCCCATTTTTATCTTTGGATATTGAATCTGGTCTCAATTCTGCTTTTCAGCAAAAGATTTTGAAAATTTCAGCTGACGTAGAATCTGATGCAGAAGATCAGTTTTATGAAGCATATGCAATTGAATTTGAAGAAGCTGGCGTCGCAATATCTGCAGCATCGCGGTTATTGACAACACTACTCGATTGCGAGGAGTTCCGCAACAAAATAAATCCCCACCATTTCATTGATTTGCTTCGCGGAATCCTCAGGTCCAATATTCCTCTCCGCAACAAAGATTGGGTAGCTGCTTGCCTAGTTAAACTAAGATCTCTCTCTGGCTCCATTTCCAGTCTCTATCCAATCAATGTGGAAGTCACACTTTATGAGACAATCCCAAGACTTCTAGAACAGATCAAAACTTCGTTCTCCCCAGAAGCACAAGAAACTGCTGTTGTAGAACTTAATAGAATAATATCTGAAGGACTGGTAGATTCCACAGAAGAAGCTATTATTTCTGAGGGGGCAATATGTTCTTTGGTGAAGCTCATTGAAGAAGGTAGTGATAGGGCTGTTGAAGCAAGCTTGGCAATACTGTATAATCTGAGCGTCGACAGTGAGAACCATTCAGCACTAGTGGCTACTGGAGCAGTGCAGGTCCTAAAAAGAATTGTTCTTTCAAACAGACCACACTGGGAACGGGCACTTCTTTTACTCAGGATTTTGCAACCGTGA 2508 0.4179 MLASSLLPSSRLHPSYFVPPINVAETHPRNRVAIFSKSTSKLAFVARTANNAHDGAVDATSPLGIDEVTSTCSDLGDGYVALFIRMLGLDRDPQDREQAIIALWKYSLGGKKCIDTIMQFPGCINLVVNLLRSESSSASEAAAGLLRSLSSVNLYRNSVADSGAIEEINRLLRQSPLPPEVKEESLSTLWNLSVDEKLWIKISKTDILPVAIKYLDDEDIKVKEAAGGILANLALSHVNHNIMVEAGVIPKLAKFLTSNPEGSKVIRKEAKNALLELFKDKDYRILVIEEGLVPVPLIGAAAYKSFTPGLHLWPTLPDGTEIERTSRQPSKYGASELLLGLNIDDKNANLEKAKVSAIVGRTQQQFLARVGALEMEEKTIPHSGCSNDARFTLLPWTDGVARLALILELEDKSAIIKAAESIATASINEHMRIAFREAGVIKHLIRLLNCDDDAVQLAVIQALERLSVSNIVCRVIEAEGILGLLVSILKSSGIAGTMVEKSLSLLSRILDLSKQMQLKFYDGPVNGSEKAFSGAKSDCVPTGFSSTEQSVSKTNTRNDILDSVFIAHLVEILKSSPPNLQEKAASVLEFVALTDPTLAPFLSLDIESGLNSAFQQKILKISADVESDAEDQFYEAYAIEFEEAGVAISAASRLLTTLLDCEEFRNKINPHHFIDLLRGILRSNIPLRNKDWVAACLVKLRSLSGSISSLYPINVEVTLYETIPRLLEQIKTSFSPEAQETAVVELNRIISEGLVDSTEEAIISEGAICSLVKLIEEGSDRAVEASLAILYNLSVDSENHSALVATGAVQVLKRIVLSNRPHWERALLLLRILQP 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01994 835 Gene3D - 618 833 IPR011989 -
Spst2g01994 835 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 163 196 IPR000225 GO:0005515
Spst2g01994 835 Gene3D - 394 605 IPR011989 -
Spst2g01994 835 Gene3D - 66 305 IPR011989 -
Spst2g01994 835 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 766 808 IPR000225 GO:0005515
Spst2g01994 835 Pfam Armadillo/beta-catenin-like repeat 428 467 IPR000225 GO:0005515
Spst2g01994 835 SMART arm_5 236 279 IPR000225 GO:0005515
Spst2g01994 835 SMART arm_5 110 151 IPR000225 GO:0005515
Spst2g01994 835 SMART arm_5 755 795 IPR000225 GO:0005515
Spst2g01994 835 SMART arm_5 428 468 IPR000225 GO:0005515
Spst2g01994 835 SMART arm_5 553 593 IPR000225 GO:0005515
Spst2g01994 835 SMART arm_5 152 194 IPR000225 GO:0005515
Spst2g01994 835 SMART arm_5 195 235 IPR000225 GO:0005515
Spst2g01994 835 SUPERFAMILY ARM repeat 410 825 IPR016024 -
Spst2g01994 835 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 122 164 IPR000225 GO:0005515
Spst2g01994 835 SUPERFAMILY ARM repeat 78 492 IPR016024 -
Spst2g01994 835 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 37 834 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01994 91 299 U-box Gene Family AT1G23030 27.014 3.93e-09 58.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01994 2 18945410 18951059 Spst2g01994 2 18945410 18951059 ECH