Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01968 ATGGAGGGTCTTCCCCAAGGTTACCGTCCCAACGTTGGTGTCTGTCTCATCAACTCCGATGGCCAGATTTTTGTGGCCTCTAGGTTGAATGTCCCAGGAGCATGGCAAATGCCTCAGGGGGGAATTGAAGAAGGTGAAGAGCCCAAATCTGCTGCCATTAGGGAACTTCGGGAAGAAACTGGCATAGTATCTGCTGAGATCATTGCTGAGGTTCAGAAATGGTTGACATATGACTTCCCTCCTGCTGTGAAGGCTAAAGTCAATCGCCTTTGGGGGGGTGAATGGCATGGACAGGCGCAAAAGTGGTTTCTTATGAGATTAACAAAAGATGACAGTGAGGTGAACTTGGCCAATGGGGAAGCAGAACCTGAATTTGCAGAGTGGAAATGGGCAGACCCTGAAGAAGTTATTGAGCAGGCAGTCGACTACAAGAGACCAACCTACGAAGAGGTTATAAGAACCTTCAAGCCTTACTTTCAAGGGAGTGCAATATCAGGCAAATGTAAATCAACGAAGTGGTGA 522 0.477 MEGLPQGYRPNVGVCLINSDGQIFVASRLNVPGAWQMPQGGIEEGEEPKSAAIRELREETGIVSAEIIAEVQKWLTYDFPPAVKAKVNRLWGGEWHGQAQKWFLMRLTKDDSEVNLANGEAEPEFAEWKWADPEEVIEQAVDYKRPTYEEVIRTFKPYFQGSAISGKCKSTKW 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01968 173 ProSiteProfiles Nudix hydrolase domain profile. 7 153 IPR000086 -
Spst2g01968 173 Hamap RNA pyrophosphohydrolase [rppH]. 2 160 IPR022927 -
Spst2g01968 173 PRINTS NUDIX hydrolase family signature 35 49 IPR020476 -
Spst2g01968 173 PRINTS NUDIX hydrolase family signature 49 64 IPR020476 -
Spst2g01968 173 Pfam NUDIX domain 8 150 IPR000086 -
Spst2g01968 173 SUPERFAMILY Nudix 7 157 IPR015797 -
Spst2g01968 173 FunFam Nudix hydrolase 25 1 159 - -
Spst2g01968 173 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 1 159 - -
Spst2g01968 173 CDD Ap4A_hydrolase_plant_like 7 155 IPR022927 -
Spst2g01968 173 PANTHER UDP/ADP-SUGAR PYROPHOSPHATASE 6 160 - -
Spst2g01968 173 ProSitePatterns Nudix box signature. 40 61 IPR020084 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01968 Spst-Chr2 18708307 18711712 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01968 2 18708307 18711712 Spst2g01968 2 18708307 18711712 ECH