Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01956 ATGGTTGTAGGATCAGGTATTAATCTTGCAATTCGCGATGCCCGTGCCAGTGATCCTTATGTCGTCGTCAAGATGGGTGATCAGAAGCTGAAGACTCGTGTTATAAAAAACAACTGCAATCCTACGTGGGATGAAGAATTTACCCTTTTTGTAAAGGATGTTAACACCCTAGTACATCTGACAGTTTATGACAAAGACACTTTCACTGTGGATGACAAAATGGGGGAGGCAGAAGTAGATTTCAAACCATTACTGAAGTGCAAGATGATGGGATTGAAAAACCTCCCAGATGGTTGTGCAGTCAAGAGGATCCAGCCAAATAGAAGTAATTGCCTTGCTGAAGAGAGCTCCTGCATTTGGAGAAATGGTGATATATTCCAAGGAATGATTTTGAGATTGAAAAATGTTGAGAGGGGGGAACTGGTTGTGGAAATGGAGTGGGTTGATGTTGTTGGTTGCAGGGGCTTATCACATGTACAACTTTAA 486 0.4198 MVVGSGINLAIRDARASDPYVVVKMGDQKLKTRVIKNNCNPTWDEEFTLFVKDVNTLVHLTVYDKDTFTVDDKMGEAEVDFKPLLKCKMMGLKNLPDGCAVKRIQPNRSNCLAEESSCIWRNGDIFQGMILRLKNVERGELVVEMEWVDVVGCRGLSHVQL 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01956 161 SMART C2_3c 1 93 IPR000008 -
Spst2g01956 161 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 3 152 IPR044562 -
Spst2g01956 161 Gene3D C2 domain 1 153 IPR035892 -
Spst2g01956 161 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 86 IPR035892 -
Spst2g01956 161 ProSiteProfiles C2 domain profile. 1 94 IPR000008 -
Spst2g01956 161 Pfam C2 domain 7 85 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01956 Spst-Chr2 18611799 18612991 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01956 29 158 C2H2 Transcription Factor Family AT1G70790 61.364 1.22e-55 170
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01956 2 18611799 18612991 Spst2g01956 2 18611799 18612991 ECH
Spst2g01956 2 18611799 18612991 Spst4g02832 4 67990310 67992324 ECH
Spst2g01956 2 18611799 18612991 Spst1g02262 1 31260998 31262761 ECH