Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01950 ATGGCAGAGTTTTGCGTGACAGGGGGTGCTGGATTCATTGCATCTTACTTGGTTAAGAGCTTACTGGAAAAGGGTTACACGGTGAGGACCACCGTGAGAAACCCAGGGGATGTGACGAAGGTTGGGTTTCTCACGGAACTAAGTGGAGCCAAAGAGCGACTGAAGATTTTCAAGGCAGATCTGTTGGTGGAAGGAAGCTTTGATGAGGCAGTGACAGGAGTTGATGGTGTCTTTCACACAGCGTCCCCTGTTCTTGTTCCACACGATGAGAACGTTCAGGCAAATTTGATTGATCCCTGCATAAAAGGAACCTTGAATGTTCTTAACTCGTGCGTAAAGGCAAAAGTGAAACGTTTTGTGCTCACTTCTTCATGCTCTTCCATAAGATACCGTGATGATGTGCAACAGCTGTGTCCTCTCAATGAATCTCATTGGACTGATTTAGAGTACTGCAAACGCTACAACCTGTGGTATGCATATGCAAAGACGGTAGCGGAGAGAGAGTGTTGGAGGATTGCACAAGAAAATGGCATCGACATAGTTGTTGTCAATCCCTCTTTCGTTGTTGGTCCACTGCTTGCACCACAACCAACAAGCACACTCCTCTTGATACTTAGCATTGTCAAAGGCTTGAAAGGGGAATATCCAAACACAACAGTGGGGTTTGTACACATAGACGATGTGGTAGCTGCTCACTTGTTGGCTATGGAGGATACCAGGGTGTCTGGGAGGCTTATTTGTTCAAGCACAGTAGCTCATTGGTCGCAAATCATTCAAATGCTTCGTTCTAAATATCCTTCTTACCCATATGAAATCAAGTGCAGCAGCCAGGAGGGAGACAACAACCCACACACCATGGACACCACCAAAATTACTCAGTTGGGGTTTCCTCCATTCATAACCCTTGAACAAATGTTTGATGACTGCATCAAAAGTTTTCAAGACAAGGGTTTCCTATGA 960 0.4542 MAEFCVTGGAGFIASYLVKSLLEKGYTVRTTVRNPGDVTKVGFLTELSGAKERLKIFKADLLVEGSFDEAVTGVDGVFHTASPVLVPHDENVQANLIDPCIKGTLNVLNSCVKAKVKRFVLTSSCSSIRYRDDVQQLCPLNESHWTDLEYCKRYNLWYAYAKTVAERECWRIAQENGIDIVVVNPSFVVGPLLAPQPTSTLLLILSIVKGLKGEYPNTTVGFVHIDDVVAAHLLAMEDTRVSGRLICSSTVAHWSQIIQMLRSKYPSYPYEIKCSSQEGDNNPHTMDTTKITQLGFPPFITLEQMFDDCIKSFQDKGFL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01950 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 317 IPR036291 -
Spst2g01950 319 Gene3D - 3 319 - -
Spst2g01950 319 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 5 310 - -
Spst2g01950 319 FunFam Dihydroflavonol reductase 1 319 - -
Spst2g01950 319 Pfam NAD dependent epimerase/dehydratase family 5 238 IPR001509 -
Spst2g01950 319 CDD FR_SDR_e 5 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01950 Spst-Chr2 18547430 18549776 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01950 5 318 Miscellaneous Gene Families AT5G19440 43.438 1.24e-85 259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01950 2 18547430 18549776 Spst2g01950 2 18547430 18549776 ECH