Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01875 ATGGAGCAACCACGGCGCTGGCACGACGTGTTTTGGTTAGGGATATTTCTGATCCATTTGGTTGGTTTGGGATTAGTTCTTGGGGTTTTAGGCCTCAACAGGTTCAAGCAAAAGAACAGGCTTGACATTGACAAGTACACCTACCGGTTCATGGAGAATGAGGCTGGTTTGACGGAGGATTACTGGCCGCTTTACGCGGTGGCCGGAGGAGTTGGAACCGCCCTTGGATGGAGTTGGTTGCTGCTATTAGGCTCACGCGCTACCCAGATGATGAAGGTGTCTGTGCACATCCTCACTACTTACCTTGCAGTGATCAGTGTTTTGTGTTTCTGGGCTGAGCAGTTTTTCTGGGGAGTTGCCTTTGCTATTGGAGCAGCACTGCAGTTTTTGTATGTGATTTCTGTCATAGACAGACTACCATTTACAATGTTGGTTCTGCAAAAATCTGCCAAAATGATATGGAATCTTCCTGAGGTCAGGAGAGTGGCATGTGCATTTATGCTTGTTGTGCTTTTATGGATGGCCTTGTGGTCATTTGGAGCTGCTGGTGTCGTGGCTTCAAGCATAGGTGATGGTGGACGCTGGTGGCTTCTTGTGGTCCTCTCTGTAAGCTTATTTTGGACAGGAGCTGTGTTTTGCAACACTGTGCATGTCATTGTGTCTGCCACAGTGGTTCGTGTTACTATCCATGGTGGTAGAGAGGCTGCGTCAATTCCTGGTAACCCCTTAATGAAATCTTTACAGTATGCTTTAACAACATCTTTTGGCAGCATTTGTTATGGATCATTATTCACGGCTGCAATTAGGACACTACGATGGGAGATCAGAGGAATCCGGTCAAAGATTGGCAACAATGAGTGTTTGCTTTGCTGTGTTGATTTCCTCTTCCATCTTGTGGAGACTCTCGTCCGTTTCTTTAACAAATATGCATATGTTCAGATTGCTGTTTATGGTAAAAGCTTTAACCGATCTGCTAGAGATGCATGGGAGCTATTCCAGTCAACTGGAGTTGAAGCAATTGTGGCCTATGATTGTTCAGGTGCTGTGCTTCTAATGGGAACCATTTTTGGGGGGCTGATAACTGGAACTTGCTCTGGTGTTTGGGCCTGGATTAAGTGGACTGACAGGGCTTTCATGATTGGGTCGACATCTATGCTCATGGGGATGGTATTGGTTGGAATAGCCATGGTTGTGGTGGAAAGTGCTGTTACATCCATATACATATGCTATGCAGAAGATCCCTCATTGATTCAGAGATGGGACACTGAGTTTTTCGACCACATGTCTGAGACACTGCGCCAACGACTTCAGCATAGGAGTTCACGTGCAAGGGAAGTTTTAACCCTCAATCACCTTGAGTCACGTATGGGAGAACACTCTTCTATTTGA 1389 0.4608 MEQPRRWHDVFWLGIFLIHLVGLGLVLGVLGLNRFKQKNRLDIDKYTYRFMENEAGLTEDYWPLYAVAGGVGTALGWSWLLLLGSRATQMMKVSVHILTTYLAVISVLCFWAEQFFWGVAFAIGAALQFLYVISVIDRLPFTMLVLQKSAKMIWNLPEVRRVACAFMLVVLLWMALWSFGAAGVVASSIGDGGRWWLLVVLSVSLFWTGAVFCNTVHVIVSATVVRVTIHGGREAASIPGNPLMKSLQYALTTSFGSICYGSLFTAAIRTLRWEIRGIRSKIGNNECLLCCVDFLFHLVETLVRFFNKYAYVQIAVYGKSFNRSARDAWELFQSTGVEAIVAYDCSGAVLLMGTIFGGLITGTCSGVWAWIKWTDRAFMIGSTSMLMGMVLVGIAMVVVESAVTSIYICYAEDPSLIQRWDTEFFDHMSETLRQRLQHRSSRAREVLTLNHLESRMGEHSSI 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01875 462 Pfam Plasma-membrane choline transporter 120 414 IPR007603 GO:0022857|GO:0055085
Spst2g01875 462 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 3 442 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01875 Spst-Chr2 17897273 17901678 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01875 2 17897273 17901678 Spst2g01875 2 17897273 17901678 ECH