Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01860 ATGTCTATCTTCCTCACTCTCTCACTCTTATGCATCATCTTTACCACCACCATTTCCACCAATCTTCCTCCTTCTTCATTTCCATATGGTTTGTCGTACCACATCGACTGCGGAAGTCCGACGAACACTACCGACCCCTTTAACACCACGTGGCTGTCGGACCGCTACTTCAGTGGCGGCGCCACTGGGATCGTGTCGGAGCCGCTGCACTTCCGCCACGCGCATGAGAAGACGCTTCGCTTCTTCCCAATCTCCTCCGGCAAGAAGAACTGCTACACTATCCCCTCCCTTCCTCCCTCGCGCTACCTTCTCCGCACGTTCGTCGTTTACGATAACTACGACGGCAGGTCCCACCCTCCCTCCTTCGACGTCTCCGTCGGCTCTACCGTCGTATTCTCCTGGCGTTCGCCGTGGCCCCAGTCACTAGCCCGCGACGGCGCCTACGCGGACCTCTTCGCCACAGTCCTCTCCTCTGAAGCCCTAATTTGCTTCTACAGCCTCGCCACGGACCCCCCGGTGATCTCCTCCATCGAGATCTTCGCCGCCGATCTGGCTTCCTACGATGCCGCCGCAATTGCCGACAACGGCACGGTGCTTGTCAACTACGGTAGACTCTCATGCGGCTCTGACCAGTGGGGGCCGGGCTTCTCCAACGACTCCGACCGGTTCGGCCGCTCATGGCAGTCCGATTCCGAGTTCCGAACTGGCCGGAGCAAAATCCTCGCCGTGTCGACGCGGAACAGTATCAGCGGGGCCGAGCAGAAGCCGAATTACTTCCCGGCGAAGCTGTACCAGACGGCGGTGATGACGGCAACGACGGCGGAGGAGGGCGGTGGGGTTTTGGAGTACGAATTGAGCGTGGACGCGAAGCTTGATTACTTGGTGTGGCTGCATTTCGCGGAGATTGAAGGGCGGGTGAGGAGGGTGGGGGGGAGGGTGTTTGATGTGTACATCAACGATGAGAATTTGACTAGGGTTGATATATACAAGCAAGTTGGGGGTTTTGCTGCGTTTACTTGGCATCACACGGTGAAGAACTTGAGTAGCCGCGTATTGAGCGTGAAGCTCGTGGGGGTGGTGGGTGCGCCTCTGATCTGTGGGATTGAGAATTACGCTCTGGTGCCTAGTGATCCTTCCACTGTTCCTGAACAAGTGGTTGCCATGAAAGCATTGAAAGATTCTCTTCGGGTACCTGAAAGAATGGGTTGGAATGGTGATCCTTGTGCTCCTACTAATTGGGATGCTTGGGAGGGAGTTACCTGCCGTATGAGTAAAGATAACACCGCTCTGGTGATAAGTCAAATTGATTTGGGAAGTCAAGGCTTGAAAGGGTTCATAAGTGACCAAATTAGTCTTTTGTCAGATTTGGTAAGCCTGAATTTGAGTTCTAATTTGTTGGTGGGTAATATACCTTCAGGACTCGATCAAAAATCCCTGATACACCTGGACTTGTCCAACAATCAGTTAACAGGCTCAATACCAGATAGTATAGCAGCTTCTTCAAGTCTGCAGCTCGCGCTTTTGAATGATAACTTATTGGAAGGACTAGTACCAGAACAACTTTATTCGATTGGTGTGCATGGTGGAGCTATAGATCTCTCTGGAAACAAAGGTTTGTGTGGTGTACCATCTCTGCCAGCTTGTCCTATGTTTTGGGAAAATGGAAAATTATCTACTCAGGGTAAAATTGCAATAGGCTTGTCCTGTTCTTTTGTTTTCTGTGCGGTACTTCTGCTGGTCTATATTTACATCAGGAGGAGAAGGAATGACTATGATTTTGCTCTACCTCATGAATTGACTTCATTGGCGGCCAAGAGAAACCGATATCAGAGGCAGAAATCCTTGATGGTTCTTGAGATGGAGAGTCAACACGCCAAGGGACTACCTTCACATTTTACCACACAATAG 1908 0.5152 MSIFLTLSLLCIIFTTTISTNLPPSSFPYGLSYHIDCGSPTNTTDPFNTTWLSDRYFSGGATGIVSEPLHFRHAHEKTLRFFPISSGKKNCYTIPSLPPSRYLLRTFVVYDNYDGRSHPPSFDVSVGSTVVFSWRSPWPQSLARDGAYADLFATVLSSEALICFYSLATDPPVISSIEIFAADLASYDAAAIADNGTVLVNYGRLSCGSDQWGPGFSNDSDRFGRSWQSDSEFRTGRSKILAVSTRNSISGAEQKPNYFPAKLYQTAVMTATTAEEGGGVLEYELSVDAKLDYLVWLHFAEIEGRVRRVGGRVFDVYINDENLTRVDIYKQVGGFAAFTWHHTVKNLSSRVLSVKLVGVVGAPLICGIENYALVPSDPSTVPEQVVAMKALKDSLRVPERMGWNGDPCAPTNWDAWEGVTCRMSKDNTALVISQIDLGSQGLKGFISDQISLLSDLVSLNLSSNLLVGNIPSGLDQKSLIHLDLSNNQLTGSIPDSIAASSSLQLALLNDNLLEGLVPEQLYSIGVHGGAIDLSGNKGLCGVPSLPACPMFWENGKLSTQGKIAIGLSCSFVFCAVLLLVYIYIRRRRNDYDFALPHELTSLAAKRNRYQRQKSLMVLEMESQHAKGLPSHFTTQ 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01860 635 Gene3D - 203 372 - -
Spst2g01860 635 Gene3D - 30 184 - -
Spst2g01860 635 ProSiteProfiles Leucine-rich repeat profile. 478 500 IPR001611 GO:0005515
Spst2g01860 635 Pfam Malectin-like domain 35 372 IPR024788 -
Spst2g01860 635 FunFam Di-glucose binding protein with Leucine-rich repeat domain 204 371 - -
Spst2g01860 635 Gene3D Ribonuclease Inhibitor 384 551 IPR032675 -
Spst2g01860 635 FunFam Putative LRR receptor-like serine/threonine-protein kinase 382 549 - -
Spst2g01860 635 SUPERFAMILY L domain-like 380 542 - -
Spst2g01860 635 PANTHER OS07G0107800 PROTEIN-RELATED 34 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01860 Spst-Chr2 17684840 17699030 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01860 37 610 Receptor kinase-like Gene Family AT2G14440 26.622 6.87e-36 142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01860 2 17684840 17699030 Spst2g01860 2 17684840 17699030 ECH