Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01842 ATGGGGAGAGTGTCTTCTCCCTCACTCCTCCCTCTCCTCTTGTTTGCAAGAGTTGCAGGGCTTGCAGTGGCAGTTCTTGTCCTCATCTGGGCCCTTGCCTTCAAATCTAGCTTCCTCACTCCCTCACTCTCCCAACAAGACCTAATCTATGCAGTTCTTCATCCTCTCCTCATGGTCATTGGCTTCATCCTCTTAAGTGGAGAAGCAATTTTGGTGCACAGGTGGTTACCTGGATCAAGGGGGTTGAAGAAATTGGTGCATTTGTGGCTTCATGGGGTGGCTTTTGCTTGTGGGATCTTTGGGATTTGGACAAGGTTCCAGGGACAGGATGGGATTGTGGCTAATTTCTATAGCCTGCATTCATGGATGGGTTTGCTTTGTGTCTCTCTCTTTGGAGCCCAGTGGTTGATTGGGTTCTGGAACTTCTGGCACCGAGGTGAGGTGCGCAGGGTGAGGATAAGGATCTTGCCATGGCATGTGTTTGTTGGGCTATACACCTATGCATTGGCCATAGCAACAGCAGAAACTGGTTTGTTAGAGAAGTTAACATTCTTACAAACAATGAGAAATGTGAGCAAGCACAGCACTGAGTCCATGGTGATTAATAGTTTAGGCTTGGGCCTTGCCCTCCTCAGTGGCTTTGTCATTTTGGCGGCTGTGTCACCTAAAGACAAGAAAGATATTCCGCGTAGCAGTTTTGAAAGGCGAGGGATTCGTTCATGGGCATTGGGTTTTGCTAGCGGCGCTGTCACAGTTGTGGGTTACCACCGCCACTGTGTTCATTCTTTCCCTGCCCCGTCTTGTTTTTCCACTCTCAGTCCTTCCTCCACCCAAACGCACCGTTTCAAACTTCTTCCTCGATTGCATCTTCTCAGCAGTCAACACCCACCCTCTAACCCTAATTCTCCGTTCCCACCAAAATGTGGTCAGCAACATCCTCCCCTTCCTTCTTCCTTTTCCTTCCGACCACCTCCCTCTCCCTCCCCCGTTCCCTCCGCCCCCTCTTCCCCCTCCCTCGCCGCCATCTTTCCGCCTCCCTCTCTTGGGCCTCTCCCTCCCCCGACCAGCCCGATGAATTTCGCGGATGGGGCCTCCCCGACGCCCCGGCCCAAACCAACAACAAAGGCTTCGGCACTTCGCTCGCTCTTCTACTCGCTGTTTTTGCTGCTTCCAGGAAAGGTTGGTTTTACTTTCCGATTCGGGAGGCCGTTGCCAGGGATGTGGAGTGATGTGCAGACTCGGCGTGATCAAAACGACACTCCGGAGTTTGACGTTTCTGGTGGCAGCAAGGCAACGGCGTCGGAGGCCAGCACGGAGGACTTGCCTGATACCATTACGGAAACGGCTGTAGAAAAGCCTGGGCGTGTTGTGATCCCGGTTTCTGTGGATTCTACCCAAGAAGAAGCATTGTCAATCTTAAAGTCACTGAAGATAATTGAAGATGATGTGGAAGCTAATGAACTGTGTACAAGAAGAGAATTTGCTAGATGGCTAGTTAAATTGAATTCATCCTTGGAAAGGAATCCCAAACACAGGATTGCTCCTATAGTATCTCTTGCTGGATCTGTAGTTACTGCATTTGATGATATTGGTATTGCTGACCCGGACTTTAGATCCATACAAGTTTTAGCAGAAGCCGGTGTGATCCCCAGCAAATTATCCTGGAGCAGCAGTTTCAATTATAGTGGATCTAACAGTCAAGAAAACATACACTTTTTTCCTGATAGATACATCTCCCGGCAAGATCTAATAGATTGGAGATCTCAGTTGGAGTACGATTTCTTTTCTGGGGTAACTGACCAGATATCAATTAGAAAAGCAGGTTATATGGATGTGAAGGAGATCACTTATCCGGCAGTTTATGTGGACATGTTGGCAGGGGATAGGAGTATACTTAGAAAAGTTTTTGGACAGAGCAAGCGATTTCAGCCAAACAAGCCTTCAACAATAGCACAAGCAGCAGTGGCTCTGACAAGTGGTAGGATGGAGGAGTCAATATCAGCTGAATTGTCAAGAATAGAAGCTGATAATTCTGCCAGGCAGGTTGAGGCAGAAGAAATCAGATCTGAGTTGCTTAACCGAGGAGAGATACAGAAGTTTTGGGATGAGAAACTTAATGAAGAGAAAAATCGTGGTTTTGATGTTGAGAGGCTTTATCATATTGAAGTAAAGAATTTGGAAGAAGAGGAGATCAATCAAGATAAGTTATATGCTGAGTATTTAAAAGAAAGGTCAGCCGTGGATTGTCAGAGGCAGTTGCTGCTTAGCTTAAAGAAAGAAGTTGATGAGATATCAGAAAAAGTTGCATCAGAGAGAGTCATATATGTAGACGAAAGGCATGTTGTACAAAATTTGCTTAAAGATTTAGAATTCAAGCATGAAGAATTGCTTGACATCAAATCAACACTAGAAGCTGAAAAAGAAGCTCTTCAGATTCTTAGATCTTGGGTGGAGGACGAGGCAAGGAGAAGCCAAGCACGGGCAGCTGTTCTCGAAGAGGTAGGGCGAAGATGGAAATGGGATGACCAAGCTTGA 2535 0.4694 MGRVSSPSLLPLLLFARVAGLAVAVLVLIWALAFKSSFLTPSLSQQDLIYAVLHPLLMVIGFILLSGEAILVHRWLPGSRGLKKLVHLWLHGVAFACGIFGIWTRFQGQDGIVANFYSLHSWMGLLCVSLFGAQWLIGFWNFWHRGEVRRVRIRILPWHVFVGLYTYALAIATAETGLLEKLTFLQTMRNVSKHSTESMVINSLGLGLALLSGFVILAAVSPKDKKDIPRSSFERRGIRSWALGFASGAVTVVGYHRHCVHSFPAPSCFSTLSPSSTQTHRFKLLPRLHLLSSQHPPSNPNSPFPPKCGQQHPPLPSSFSFRPPPSPSPVPSAPSSPSLAAIFPPPSLGPLPPPTSPMNFADGASPTPRPKPTTKASALRSLFYSLFLLLPGKVGFTFRFGRPLPGMWSDVQTRRDQNDTPEFDVSGGSKATASEASTEDLPDTITETAVEKPGRVVIPVSVDSTQEEALSILKSLKIIEDDVEANELCTRREFARWLVKLNSSLERNPKHRIAPIVSLAGSVVTAFDDIGIADPDFRSIQVLAEAGVIPSKLSWSSSFNYSGSNSQENIHFFPDRYISRQDLIDWRSQLEYDFFSGVTDQISIRKAGYMDVKEITYPAVYVDMLAGDRSILRKVFGQSKRFQPNKPSTIAQAAVALTSGRMEESISAELSRIEADNSARQVEAEEIRSELLNRGEIQKFWDEKLNEEKNRGFDVERLYHIEVKNLEEEEINQDKLYAEYLKERSAVDCQRQLLLSLKKEVDEISEKVASERVIYVDERHVVQNLLKDLEFKHEELLDIKSTLEAEKEALQILRSWVEDEARRSQARAAVLEEVGRRWKWDDQA 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01842 844 Gene3D - 4 229 - -
Spst2g01842 844 SMART 561_7 53 178 IPR006593 -
Spst2g01842 844 MobiDBLite consensus disorder prediction 409 441 - -
Spst2g01842 844 PANTHER GPI-ANCHORED ADHESIN-LIKE PROTEIN 429 841 - -
Spst2g01842 844 Coils Coil 786 813 - -
Spst2g01842 844 Coils Coil 723 743 - -
Spst2g01842 844 FunFam Cytochrome b reductase 1 6 228 - -
Spst2g01842 844 Coils Coil 747 767 - -
Spst2g01842 844 MobiDBLite consensus disorder prediction 298 359 - -
Spst2g01842 844 ProSiteProfiles Cytochrome b561 domain profile. 15 220 IPR006593 -
Spst2g01842 844 CDD Cyt_b561_ACYB-1_like 47 186 - -
Spst2g01842 844 Pfam Eukaryotic cytochrome b561 53 184 IPR006593 -
Spst2g01842 844 MobiDBLite consensus disorder prediction 422 441 - -
Spst2g01842 844 MobiDBLite consensus disorder prediction 291 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01842 Spst-Chr2 17536341 17555164 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01842 1 227 Chloroplast and Mitochondria Gene Families AT1G26100 67.401 1.43e-86 273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01842 2 17536341 17555164 Spst2g01842 2 17536341 17555164 ECH