Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01833 ATGACTGACATCACTGACGACATAGCGGAGGAAATCTCCTTCCAAGGCTTCGATGATGACTGCAATATGCTTGGAAGTCTTCTCAATGACATTTTGCAGAGAGAGGCTGGCCCCTCCTTCGTTGATAAGCTCGAAAAAATCCGAGTCCTAGCACAGAGTGCTTGTAACATGAGACATGCGGGGATTGAAGACATGGCTGAGCTGCTAGAGAAGCAATTGGCTTCAGAATTATCCAAGATGACACTAGAAGATGCTCTTACCATTGCTCGTGCCTTTAGCCACCATCTTACTTTGATGGGTATAGCTGAAACTCACCATAGGGTTCGTAGAGGAGGAAACCTGGTTCTTGTTGCAAGATCTTGTGATGACATCTTTAACCAGCTGTTGCAAGATGGAGTTACTCCAGACGAGCTTTATGACTCAGTTTGCAAGCAGGAGGTCGAAATTGTTCTCACAGCTCATCCCACTCAAATTAATCGTCGTACTTTGCAATACAAACACATGAAAATTGCTCATCTTTTGGATTATAATGATCGACCTGATCTTGGCCCTGAAGATCGAGATATGCTGATTGAAGATCTGGTGAGAGAGATAACTTCAATATGGCAGACAGATGAACTTAGGCGTGAAAAACCCACACCAGTTGCTGAAGCCAGAGCCGGATTGAATATTGTGGAGCAATCACTCTGGAAAGCTGTTCCTCGTTATTTACGTCGAGTTAGCAGTGCTTTAAAGAAGCACACAGGAAAACCACTTCCATTGATTTGCACTCCAATAAAGTTTGGATCTTGGATGGGAGGTGACAGAGATGGAAACCCAAATGTGACAGCAAAGGTCTCAAAAGAGGTTTCACTCCTGTCAAGATGGATGGCAATTGACTTATACGTCCGGGAAATAGATAGCCTGAAATTTGAGCTATCCATGAAACGGTGCAGCGATGAGTTGTCAAAATTGGCACAAGAAATTCTAGAAGAAGCTAATGATGAGGAGAATCACCGTGAGAATTGGAATGAATCTATGAGTAGAAGTCAATTGAAACATCCTAATCAACAAGCTTCATCACTTCCAACTAAACTTCCACCTGGAGCTCATTTACCCTCTTGTGCTGAAAAGGGTGGATCTGAGCATCCCAGACTCATGCCAGGAGCTGATCACAAGCAACTCAATCATAAGGGTGGTCAGACTTCAAGTTCATCAGAGACCAATGGTGGCGGTTCCAATCTCCGTCCACCAATACCAATTTCACCAAGTTCCAGTGTTTCTTCATTAGTTTCAATGGCACGCTCTCCTTCTTTCAACTCTAGCCAGCAACTTCTTGCTCAGAGGAAATTGTTTGCAGAATCCCAGACAGGAAGAACCAGTTTCCATAGGCTTTTGGAGCCGAAGCTCCCTCCGCTTCCTGGAATTGCCCCTTATAGAGTTGTCCTTGGAAATGTAAAAGATAAGGTATTACTTCAAAATTGGCTGCTTGGACCCATGTATTCTGTTTCTGCTGCTAAAGCTGATTATGAAATCAAGAGGGCAGAACCATTAAGGAATGATATTATTGCAGAAAATGTTGTGAATGTCATATTGAAGACCTATGGATCATTAACTTATATGTATTTAGGAACTATGGTGGACAAGATGAAAATCGTACTTCTGAGAACTCGTAGACGGTTGGAGCTTCTTATCGAGGATGGTCCATGCGAACATAACTCTATGGATTATTATGAAACAACAGATCAGCTTTTGGAACCCCTACTCCTTTGCTATGAATCTTTGCAATCATGTGGATCTGGGGTGCTAGCTGATGGTCGACTTGCTGATCTGATTCGAAGAGTTACTACTTTCGGGATGGTGTTAATGAAACTTGACTTGCGTCAGGAATCTGGCAGACATGCTGAAACACTTGATGCAATTACAAGGTATTTGGATTTGGGAACATACAGTGAGTGGGATGAAGAAAAGAAACTGGACTTCTTAACTAGAGAGCTGAAAGGGAAGAGACCACTGGTTCCCCCTAGTATAGAGGTTGCTCCAGATGTTAGAGAAGTCTTGGACACGTTCCGAACTGCTGCTGAGTTAGGGAGCGATTCATTTGGTGCCTATGTGATATCTATGGCCTCAAATGCCAGTGATGTTCTTGCAGTAGAGCTTTTGCAAAAGGATTCACGACTTGCTGTTAGTGGGGAGTTGGGAAGAGCTTGTCCTGGTGGAACGCTGCGGGTGGTTCCTCTATTTGAAACTGTGAAGGACCTGAGAGGAGCTGGTTCAGTTATCAGAAAGCTTTTGTCAATAGATTGGTATCGCCAACACATCATTAAAAACCATAATGGGCATCAAGAGGTTATGGTTGGGTATTCTGATTCTGGGAAAGATGCTGGTCGCTTCACTGCTGCATGGGAACTATACAAAGCTCAAGAAGATGTTGTGGCTGCATGCAAAGAGTATGGTATTAAGGTTACCCTCTTCCATGGCCGTGGGGGGAGTATTGGCCGCGGTGGTGGCCCAACATATATGGCTATTCAGTCTCAACCACCCGGCTCTGTGATGGGAACCCTTCGTACAACTGAGCAAGGGGAGATGGTGCAGGCCAAGTTTGGGTTGCCACAAACAGCTGTTAGACAACTTGAGATATACACAACAGCTGTGCTACTTGCTACACTTCGTCCTCCTCTCCCGCCACGTGAAGAAAAGTGGCGCAATCTCATGGAAGACATTTCAAAGATCAGTTGCCAGTGTTACCGCAGTGTGGTGTATGAAAATCCAGAATTCCTGTCCTACTTCCATGAAGCCACACCTCAATCAGAGCTTGGCTTCCTCAACATTGGTAGCCGCCCCGCAAGGCGAAAGAGCACCACTGGAATTGGAAACCTCCGTGCCATTCCCTGGATTTTTGCATGGACTCAAACCAGGTTTGTTCTTCCAGCATGGCTTGGAGTTGGAGCAGGCTTGAAAGGTGCTTGTGAGAAAGGACAAACTGAAGAGCTAAGGGCCATGTACAAAGAGTGGCCTTTCTTTCAAAGCACAATAGACTTGATTGAGATGGTTCTAGGAAAAGCAGACATTCCTATTGCCAAGCACTATGATGAAGTTCTTGTCTCAGAGAAGAGACGAGAACTTGGAAGTCAACTCAGGAATGAGCTCATCCAAACTAGCAAGTTTGTGCTATCTGTTAGTGGGCATGAGAAACCTCAGCAGAATAACAGGAGCTTAAGGAAACTGATTGAGAGTAGACTTCCCTTCCTCAATCCCATGAACATGTTGCAAGTAGAGATACTCAAGAGGCTAAGAATTGATGATGACAACCTCAAAGCCAGAGATGCCTTGCTTATAACCATTAATGGCATTGCTGCTGGGATGAGAAACACTGGTTAA 3360 0.4452 MTDITDDIAEEISFQGFDDDCNMLGSLLNDILQREAGPSFVDKLEKIRVLAQSACNMRHAGIEDMAELLEKQLASELSKMTLEDALTIARAFSHHLTLMGIAETHHRVRRGGNLVLVARSCDDIFNQLLQDGVTPDELYDSVCKQEVEIVLTAHPTQINRRTLQYKHMKIAHLLDYNDRPDLGPEDRDMLIEDLVREITSIWQTDELRREKPTPVAEARAGLNIVEQSLWKAVPRYLRRVSSALKKHTGKPLPLICTPIKFGSWMGGDRDGNPNVTAKVSKEVSLLSRWMAIDLYVREIDSLKFELSMKRCSDELSKLAQEILEEANDEENHRENWNESMSRSQLKHPNQQASSLPTKLPPGAHLPSCAEKGGSEHPRLMPGADHKQLNHKGGQTSSSSETNGGGSNLRPPIPISPSSSVSSLVSMARSPSFNSSQQLLAQRKLFAESQTGRTSFHRLLEPKLPPLPGIAPYRVVLGNVKDKVLLQNWLLGPMYSVSAAKADYEIKRAEPLRNDIIAENVVNVILKTYGSLTYMYLGTMVDKMKIVLLRTRRRLELLIEDGPCEHNSMDYYETTDQLLEPLLLCYESLQSCGSGVLADGRLADLIRRVTTFGMVLMKLDLRQESGRHAETLDAITRYLDLGTYSEWDEEKKLDFLTRELKGKRPLVPPSIEVAPDVREVLDTFRTAAELGSDSFGAYVISMASNASDVLAVELLQKDSRLAVSGELGRACPGGTLRVVPLFETVKDLRGAGSVIRKLLSIDWYRQHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACKEYGIKVTLFHGRGGSIGRGGGPTYMAIQSQPPGSVMGTLRTTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATLRPPLPPREEKWRNLMEDISKISCQCYRSVVYENPEFLSYFHEATPQSELGFLNIGSRPARRKSTTGIGNLRAIPWIFAWTQTRFVLPAWLGVGAGLKGACEKGQTEELRAMYKEWPFFQSTIDLIEMVLGKADIPIAKHYDEVLVSEKRRELGSQLRNELIQTSKFVLSVSGHEKPQQNNRSLRKLIESRLPFLNPMNMLQVEILKRLRIDDDNLKARDALLITINGIAAGMRNTG 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01833 1119 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 150 161 IPR018129 -
Spst2g01833 1119 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 777 789 IPR033129 -
Spst2g01833 1119 MobiDBLite consensus disorder prediction 326 420 - -
Spst2g01833 1119 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 541 1119 IPR021135 GO:0006099|GO:0008964|GO:0015977
Spst2g01833 1119 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 542 1119 IPR015813 GO:0003824
Spst2g01833 1119 Gene3D Phosphoenolpyruvate/pyruvate domain 420 613 - -
Spst2g01833 1119 Hamap Phosphoenolpyruvate carboxylase [ppc]. 9 1119 IPR022805 GO:0006099|GO:0008964|GO:0015977
Spst2g01833 1119 MobiDBLite consensus disorder prediction 389 420 - -
Spst2g01833 1119 Gene3D Phosphoenolpyruvate/pyruvate domain 289 354 - -
Spst2g01833 1119 MobiDBLite consensus disorder prediction 341 357 - -
Spst2g01833 1119 PRINTS Phosphoenolpyruvate carboxylase signature 261 276 IPR021135 GO:0006099|GO:0008964|GO:0015977
Spst2g01833 1119 PRINTS Phosphoenolpyruvate carboxylase signature 202 218 IPR021135 GO:0006099|GO:0008964|GO:0015977
Spst2g01833 1119 PRINTS Phosphoenolpyruvate carboxylase signature 149 162 IPR021135 GO:0006099|GO:0008964|GO:0015977
Spst2g01833 1119 MobiDBLite consensus disorder prediction 326 340 - -
Spst2g01833 1119 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 18 342 IPR015813 GO:0003824
Spst2g01833 1119 Pfam Phosphoenolpyruvate carboxylase 19 338 IPR021135 GO:0006099|GO:0008964|GO:0015977
Spst2g01833 1119 Pfam Phosphoenolpyruvate carboxylase 541 1119 IPR021135 GO:0006099|GO:0008964|GO:0015977
Spst2g01833 1119 Coils Coil 312 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01833 Spst-Chr2 17410137 17419833 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01833 2 17410137 17419833 Spst2g01833 2 17410137 17419833 ECH