Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01819 ATGCACAATGCATATGTTAATTCAACAGTATATGCTGTTAGGTGTAAAGAGTCATTCTCATTATCTTTCAATGGCCACTCAAACTTCTGTTATGAAAGATTTGACAGAACCCCATCATACTGTTTGTCATGCTGTGGTTGTTGTGATTGCTGTTCAGTCTCCACTTATAGAGTACCCATAAAGCCTTGCCTTCTAAATGGGTTGAGGCAATCTGCCCTTCTTCAATTGTCGGCAACTAGAAGGTTGATATTGGGTGGTGGAGATCATTATCTTTCCCGGATACCAGCTTATGGTTTCCTCAGAGATTGCCAGGAGCTTAATTCTTTTGTCAATGAGAGAACTGTTTGCAATACTAGTAGACGGAGCATAAAGGGAAGATATATTCGTGCTGCCTCACAGAAAGGGAGAAAATTTTCTCATTTGTTTGGTTCTGATGATGTCGAAGCAGTTCTCAGCTTGTTGAATGAGGAGGCAGATAAGGATGTTGCCATTTGTAGTCAATGTAAGAATGGGTTTACATCAAAAAGAATGGAAGTTGAGAAGACAAGAAAAAATGTGATGAGAGATGGGCATTTGAGTTCAAGTGAGAAAGTAAAAACAGAGAAAAAAGGAGATTTGAAGCGACATCAGTCATCCACCATAGAATTGAGGAGAGAATTTGAAAATCCCAACAAAGAAAGTGAAGCCTTTGCAAAAAGTGAAAACCATAGGAAACGGAGAGATCTGTCTAGTTGTTCATCTTATTACTCTCTCTCATCAGGAGATTTTGGGAGTGAGCTGGAAGTTCAGGATGAGATTGGTTTGGAAGAATCATCACTGGAATATGAGAAGGGTGAAACAAATCGTGTGGAGGAACAAGTGAAGGAAGAATTCAAAAGGCAAGGGGATAACTCAAAGAAGCTGCTGGGTGTTTCAAATAAGGAAAGATTTGCATTTGGTCAGGATATTGATTGGAACCTAAGGAAGAAGTCTGAAAAGAAGCTGACCGAGGGAGCTCTGCAAAACACAGAATCCACAAGGGAGCAACAGGATATGCATTTGAGAGAATTTAAAACACATGAATCTGGTCATAAAAAATCATCTATTTCACAAAAACAAATCAATAGTGAGGAAGATAAGCCATCTTTTGTTGACAATTTGGATAAGAAAACAAACAAGTCATATCTTCAAACAGTAAACAGAAGAAAGCATCAATCTATTGATTTACAAGAATCCAGTTGTGGTGAAGTTGAGACAACTTTGTTATCCCGAAAGGAATTCAGTGGCAGGGAAGGGAAGCTTGAGATATCAGAAACACTATTGAAGGAAACAGCTGACGAACATAAAAAAATTGTTGGCTCAACTTCTACCACAGGAAAGGAAATTTTGAAATCAAAGAAGGCATTCAGTGGCAGGGAAGGGGACCTTGCAATATCAGAAACACTTTTAAAAGGAACAAAGGATAAACATGAAAAAATTGTTGGTTCTACTTCTACCTCTGGAATGGATTTGCTAGATAGAAGTTCCCAGAAATATATTGGAAATTTAAAAATTGAAGACACTGAACGGACCTCGGATACTAGGATAAAGGGCATGGGAGTGAAAAATGTTTCAGTTTTGAGTTCTGTTCAGGGAGTGGAGGAGCAGGAATACCAAAAAGGAGAGAATATCATTTCACAGGCTAATGCTGAAGATACATCTATCCTAAAGTCTAGAGCTAGATTAAAGAACATGGAAGAAAATTTAAACATAAGCTCAGATTCAAGGGGTACATGGCTCCAAACAGATAAAAGGACAACTCAGAGTTTCCAAAACAGGAAAGGATCTGAACTTGTCAGCACTTTATCAGAAGGCTATGCCAGTGATGAAAAGCAAGTATCAAGTTCTCAAAAAGCTTATGAGAAGGTGAGATTCATTCCAAAATGTATATCAACATCAGTTGTTAGAACTAGAGAAAGTTCTAGCCAAACTGATGAAACAATTGCAAATTTTGAATTGGCCAGAATGGACCAAAGATCTAGCAACCTATCAATTTCTGATGAAACCACGTCAAGAGAGGAATCCAGCTTGCAGGGATCAGTGGATTTGGTTTCTGGTGGAAAACTTGTTATGTTAGCAGCAGATGAAGAAAGAAGCTCTGCAACAATGTTGATCCCTTCTTCCGAAATGGGTGGAGATTCAGCACATGTTGAGCTCACTGCAGGAATTGCAAGCCCTAAGATCTTCCTTGAAACTTCAGAAAGTGACTCTTCTGCTATGTATGCAAATTCAAGAAGAGGTTCTGCTTTGTATCCAGATGTTATTGGTTCAGCTGATCGTTTAGAGAAATCATCTAGAAAGTTTGTTGATGAGTTTGCTGAGAGGTTCAGGCATGAAGTAACAACTTCCCAAGCACAAGAGATGGAAGTTAAAGGAACAAAGTTGACACTTGAAGTTGGGGGTAATCAGATCTACAGCTCGAGCCAACAAGGCACTCAAAATGATGCTCAGTCAAAGGAGCATGATTCAGGTCGTTCCTCTGGGCTTCCTGGGACCAAAGGTCCTTCTGATGAGATGTGGGATGTCACTGAGCCATCTATTGAGCAAGGTCTAGTAGCCAAAGAAACAAAGATCAGCAAAGAAACTGGGAAAACAATTGTTACTAGAACTGGGAGGTCCTTATGGGGTATAATTGGTGATATTGTTCGATTGCGCTGGGGTACTTCAGCTGGAAGATCAGCTGAGAGGAACTCACCAAACAAGTCTGAAAGTGAGACCTGGTTTTCTGAGCAGGATCATGATGAAACCACTAAAACTAATGTCATTTACGAAACAAATGCACCACCACATGCCATGATTTCTGATAACCTAAAACCAGTTAAACAATATGCCCAAAGTGAGGGAGAGACGTCTGACAATAAAAAACTGAAGGACAAAGGAAAACATCTTGAAATTGGATCGTTAACACCAAATACATTGGAAAGTGGATCAATGTCAGTAGGTGCCTCTTATACTTCTGAAGAGGCAAATGCTAGTTGGACTGAAGATAAAAAAGATTTGAAAGGCACTACTTCTGACACACAAAATGTGGAATTGCCAATTTCAATACCTGTGAGAGGACCTCCTATTGTTGGAGATATTGTAAACATGGGTGGATCTGACATGACTGGAAGGGTGGAGTTTGTGGGGCCAATCAAGGAATCTGTTGCTCCTGTGAAGTCTGAATTATCCGGCTCAGAGAGAAAGGATGGAGAGTTAAAGCAACGGAAGCTTCAACGGACCAGGCAAGTTGTCAGAGATAGGTTTGATGACTGGGAAGAAGCCTATCAACGTGAACTTGAGCAGCGAAGAATAGATGAAATGTTCATGAGGGAAGCACTCTTGGAAGCTAAGAAGGCTGCTGATACATGGGAGGTCCCTGTTGGTGCTATTCTTGTGCAGCATGGGAAAATTATTGCTCGAGGGTGCAACTTGGTGGAAGAATTACGGGACTCCACTGCCCATGCCGAGATGATTTGTATACGAGAAGCTTCAAACCTTCTTCGGACATGGAGACTATCTGACACCACACTTTATGTAACGCTTGAGCCATGTCCAATGTGTGCTGGTGCTATCCTTCAGGCAAGAATTGACACTCTTGTGTGGGGTGCTCCCAATAAGCTTCTTGGAGCTGATGGTAGCTGGATTAGGCTTTTCCCTGATGGAGGAGAAAATGTATCAGAACCAAGAGATGTGCCACCTGCCCCAGTTCATCCATTTCATCCAAAGATGAAAATAAGAAGAGGGGTCCTAGCCACGGAGTGTGCAGATGCAATGCAGCAATTCTTTCAACTAAGAAGGAAAACTAAGAAAGAGGAACCCCCAAAGGACCCTTCTTGCCTTCCTGTTTCTCACCACCACCCTTCCAAGATACTCAACAAGATACACGACGTTTTCCACATAATGTTCTGTTTGTAA 3915 0.4089 MHNAYVNSTVYAVRCKESFSLSFNGHSNFCYERFDRTPSYCLSCCGCCDCCSVSTYRVPIKPCLLNGLRQSALLQLSATRRLILGGGDHYLSRIPAYGFLRDCQELNSFVNERTVCNTSRRSIKGRYIRAASQKGRKFSHLFGSDDVEAVLSLLNEEADKDVAICSQCKNGFTSKRMEVEKTRKNVMRDGHLSSSEKVKTEKKGDLKRHQSSTIELRREFENPNKESEAFAKSENHRKRRDLSSCSSYYSLSSGDFGSELEVQDEIGLEESSLEYEKGETNRVEEQVKEEFKRQGDNSKKLLGVSNKERFAFGQDIDWNLRKKSEKKLTEGALQNTESTREQQDMHLREFKTHESGHKKSSISQKQINSEEDKPSFVDNLDKKTNKSYLQTVNRRKHQSIDLQESSCGEVETTLLSRKEFSGREGKLEISETLLKETADEHKKIVGSTSTTGKEILKSKKAFSGREGDLAISETLLKGTKDKHEKIVGSTSTSGMDLLDRSSQKYIGNLKIEDTERTSDTRIKGMGVKNVSVLSSVQGVEEQEYQKGENIISQANAEDTSILKSRARLKNMEENLNISSDSRGTWLQTDKRTTQSFQNRKGSELVSTLSEGYASDEKQVSSSQKAYEKVRFIPKCISTSVVRTRESSSQTDETIANFELARMDQRSSNLSISDETTSREESSLQGSVDLVSGGKLVMLAADEERSSATMLIPSSEMGGDSAHVELTAGIASPKIFLETSESDSSAMYANSRRGSALYPDVIGSADRLEKSSRKFVDEFAERFRHEVTTSQAQEMEVKGTKLTLEVGGNQIYSSSQQGTQNDAQSKEHDSGRSSGLPGTKGPSDEMWDVTEPSIEQGLVAKETKISKETGKTIVTRTGRSLWGIIGDIVRLRWGTSAGRSAERNSPNKSESETWFSEQDHDETTKTNVIYETNAPPHAMISDNLKPVKQYAQSEGETSDNKKLKDKGKHLEIGSLTPNTLESGSMSVGASYTSEEANASWTEDKKDLKGTTSDTQNVELPISIPVRGPPIVGDIVNMGGSDMTGRVEFVGPIKESVAPVKSELSGSERKDGELKQRKLQRTRQVVRDRFDDWEEAYQRELEQRRIDEMFMREALLEAKKAADTWEVPVGAILVQHGKIIARGCNLVEELRDSTAHAEMICIREASNLLRTWRLSDTTLYVTLEPCPMCAGAILQARIDTLVWGAPNKLLGADGSWIRLFPDGGENVSEPRDVPPAPVHPFHPKMKIRRGVLATECADAMQQFFQLRRKTKKEEPPKDPSCLPVSHHHPSKILNKIHDVFHIMFCL 1304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01819 1304 MobiDBLite consensus disorder prediction 896 921 - -
Spst2g01819 1304 MobiDBLite consensus disorder prediction 665 684 - -
Spst2g01819 1304 FunFam tRNA-specific adenosine deaminase 1097 1276 - -
Spst2g01819 1304 SUPERFAMILY Cytidine deaminase-like 1101 1270 IPR016193 GO:0003824
Spst2g01819 1304 MobiDBLite consensus disorder prediction 954 970 - -
Spst2g01819 1304 MobiDBLite consensus disorder prediction 948 1012 - -
Spst2g01819 1304 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 1078 1269 - -
Spst2g01819 1304 MobiDBLite consensus disorder prediction 187 212 - -
Spst2g01819 1304 CDD nucleoside_deaminase 1109 1216 - -
Spst2g01819 1304 MobiDBLite consensus disorder prediction 897 911 - -
Spst2g01819 1304 MobiDBLite consensus disorder prediction 974 996 - -
Spst2g01819 1304 MobiDBLite consensus disorder prediction 341 380 - -
Spst2g01819 1304 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 1103 1225 IPR002125 -
Spst2g01819 1304 Gene3D Cytidine Deaminase, domain 2 1093 1277 - -
Spst2g01819 1304 MobiDBLite consensus disorder prediction 811 847 - -
Spst2g01819 1304 Pfam MafB19-like deaminase 1106 1205 IPR028883 GO:0002100|GO:0008251
Spst2g01819 1304 Hamap tRNA-specific adenosine deaminase [tadA]. 1109 1266 IPR028883 GO:0002100|GO:0008251
Spst2g01819 1304 MobiDBLite consensus disorder prediction 329 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01819 Spst-Chr2 17290827 17296790 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01819 2 17290827 17296790 Spst2g01819 2 17290827 17296790 ECH