Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01655 ATGCTTCGTGTCATGGGTGTTGCTGCTGATTTGAATCACCTCTACTGGTCACCCCACCAAGACTTGTTCTTTTCTGCTGCACACGCGGGTTGGGCATTGATGATGGAAGATTATATTAACCATCACCTTCAGCAGCAGCAACAAAACCATCTTCAAGGACAGCAACAGCAGCAGAATCAGAATATCGAGTGTGAAAGGATGGAGAGGTACCCGAGAGATTTGCTTCAGGGGTTTGTCATGAGAGGTGTTGCTGTTAGGGATGATAACGTTAGCATAGCCCAACGTCTTCATCACCATCATCATGAACAACAGCAACAGCATGAAGAGGAGGATGAAGATGTTGAGTTGAACCTTGGTCTCTCTCTAGGAGGAAGGTTTGGGGTGGATAAGAACGCAAAAAAGAAGAAGCTTATGCGTTCTTCTTCTGTGGTGGGGACAATGCCTCTATTCAGGGAGGACGACGCCGTAGCGCCGCCTCTCGCAGCGTTTCCTGCGCTGATGAGAACGTCGTCGCTGCCGACCGAGACCGAGGAGGAGTGGCGGCGGCGGAAGGAGATGCAGACGCTGCGTCGGTTGGAGGCCAAGAGACGCCGGTCCGAGAAGCAGAAGGGATCCCGGGAGGCCGTCATCGGTGGCTGCGCGGCCGCCGAGGAGGTGGAGGGTGGAAGTGTAGCGGCAATGGGGTTGAACAGATTTGGTTCTTCCACACTGTCGCCGCCACCACTGGGTTGGGGTGTAGCGGCGCCGAAGCAGGTTGTTCTTGGTGATGTGTTGGGGAAGGGGAAAGGTTTTCAAGGGCTGTTTGGGCAGCCATCTTCTCAGGGATCGGCAGATTCGCAAGGTGGAAGCTCTTCATCAGTGTCTGAAATGGATAGCAAAGCTATTTTAGATAATGCTCCGTGTGTAGTTGCAGTTTATAAAGTATGTCTTGGCAGTGTGCTCAACATGACAGGATCAGGTAGTTGTGGTGAAGCAAGCCCTGCTAGTAATCAATCAGCACAAGACCGATTCAGCCAGGATGCTGTGGGTTTAGGGGCTAAGACAGATGAGAATGTGGGTAGAACTTCCAAAGCTGAGGTGGAGAATCCATCTAAGAAACCCCATCCTTCCCAAAACACAATGAGAAAGCAAATTGGGACAAACTCAATGGAAGACATGCCTTGTGTGTTTACAAAAGGGAATGGTCCTAATGGGAGAAGGATTGAGGGAATCTTGTACAAATATGGTAAAGGGGAGGAAGTAAGAATCATGTGTGTGTGCCATGGAAACTTCCTCTCTCCAGCTGAGTTTGTTAAGCATGCTGGTGGTGGGGATGTTGCACACCCCCTTAGACACATTGTTGTGAACCCTTCTGCTGCACCCTTTTAG 1368 0.5066 MLRVMGVAADLNHLYWSPHQDLFFSAAHAGWALMMEDYINHHLQQQQQNHLQGQQQQQNQNIECERMERYPRDLLQGFVMRGVAVRDDNVSIAQRLHHHHHEQQQQHEEEDEDVELNLGLSLGGRFGVDKNAKKKKLMRSSSVVGTMPLFREDDAVAPPLAAFPALMRTSSLPTETEEEWRRRKEMQTLRRLEAKRRRSEKQKGSREAVIGGCAAAEEVEGGSVAAMGLNRFGSSTLSPPPLGWGVAAPKQVVLGDVLGKGKGFQGLFGQPSSQGSADSQGGSSSSVSEMDSKAILDNAPCVVAVYKVCLGSVLNMTGSGSCGEASPASNQSAQDRFSQDAVGLGAKTDENVGRTSKAEVENPSKKPHPSQNTMRKQIGTNSMEDMPCVFTKGNGPNGRRIEGILYKYGKGEEVRIMCVCHGNFLSPAEFVKHAGGGDVAHPLRHIVVNPSAAPF 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01655 455 MobiDBLite consensus disorder prediction 265 289 - -
Spst2g01655 455 Pfam Ethylene-responsive binding factor-associated repression 109 145 IPR012463 -
Spst2g01655 455 PANTHER AFP HOMOLOG 2 70 452 IPR031307 GO:0007165
Spst2g01655 455 MobiDBLite consensus disorder prediction 346 375 - -
Spst2g01655 455 MobiDBLite consensus disorder prediction 320 338 - -
Spst2g01655 455 Coils Coil 182 202 - -
Spst2g01655 455 Pfam Putative nuclear localisation signal 166 292 IPR032310 -
Spst2g01655 455 MobiDBLite consensus disorder prediction 267 289 - -
Spst2g01655 455 Pfam Tify domain binding domain 414 448 IPR032308 -
Spst2g01655 455 MobiDBLite consensus disorder prediction 320 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01655 Spst-Chr2 15576305 15580027 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01655 2 15576305 15580027 Spst2g01655 2 15576305 15580027 ECH