Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01619 GTTGTAATCGATAATGAAGCCTGCAAGGATGCCACGGTTATACGCGTTGATAGTGCAAACAAGCATGGAATACTTCTTGAAGTAGTACAGATCCTCACTGATCTTAACCTTATCATAACTAAGGCTTACATATCTTCTGATGGTGGATGGTTCATGGATGTTTTCAATGTTACTGGCCAAGATGGAAACAAAGTTACTGATGAAGCCATTTTGGATTACATTAGAAAGTCTCTTGGTCCCGAATCTTGTGTTACTTCTCCCATGAGATCTGTTGGGGTTGAGCAAACAATGGACCACACAGCAATTGAGCTTATGGGAAGTGACAGACCAGGATTACTTTCAGAATTGAGTGCTGTTTTGACCAACCTCAAGTGCAATATTGTGAATGCAGAGGTGTGGACTCACAACACCCGTGCAGCCGCCGTAATGCACGTGACAGATGAAGAGACCGGATCTGCTATCACTGACCCTAAGAGGCTCTCTATAATCAAGGAACTTCTATGCAATGTGCTTGGTGGTGGCAACAAGAAGAGGGGGGCTAAGACTGTTGTCACAGATGAAGCCACACACACTGAGAGAAGGCTTCACCAAATGATGTTTGCTGATAGGGATTATGAACGAGAAAATGATGATGACTTTGATGAGAAGCAAAGGCCAAATGTCAATGTTGTGAATTGGTCTGACAATGATTATTCTGTAGTAACTATTCAGTGTAAGGACAGGCCAAAGCTTCTCTTCGACACAGTATGTACTTTGACTGACATGGAGTATGTGGTTTTTCATGCAAATATCGATGCCAAGGGGCCAGAAGCATATCAGGAATATTACATCAAGCATATTGACGGGTCCCCTGTGAAATCAGATGCAGAAAGACAAAGAGTGATACAATGTCTTGCAGCTGCAATTGAGAGAAGAGTTTCTGACGGTTTGAAGCTAGAACTCTGCACCACCGACAGAGTTGGACTTCTATCTGATGTCACACGTATCTTCAGAGAGAATAGTCTCACAGTTACAAGGGCAGAAGTGGCCACAAAAGGAGGCAAAGCTGTCAACACTTTCTATGTTCGTGGGGCTTCTGGTTTCCCTGTTGATTTGAAGACCATAGAATCCATTAGGCAAACAATTGGCAACACAATCCTTAAAGTAAAGGGTAGCCCTTCAGAGATGAAATCTGTTCCTCAGGATTCTCCCACCAGATCCCTCTTTAGTGGTCTTTTCAAGTCCAGATCTTTTGTGAACTTTGGCTTGGTTAAGTCTTATTCTTGA 1266 0.4297 VVIDNEACKDATVIRVDSANKHGILLEVVQILTDLNLIITKAYISSDGGWFMDVFNVTGQDGNKVTDEAILDYIRKSLGPESCVTSPMRSVGVEQTMDHTAIELMGSDRPGLLSELSAVLTNLKCNIVNAEVWTHNTRAAAVMHVTDEETGSAITDPKRLSIIKELLCNVLGGGNKKRGAKTVVTDEATHTERRLHQMMFADRDYERENDDDFDEKQRPNVNVVNWSDNDYSVVTIQCKDRPKLLFDTVCTLTDMEYVVFHANIDAKGPEAYQEYYIKHIDGSPVKSDAERQRVIQCLAAAIERRVSDGLKLELCTTDRVGLLSDVTRIFRENSLTVTRAEVATKGGKAVNTFYVRGASGFPVDLKTIESIRQTIGNTILKVKGSPSEMKSVPQDSPTRSLFSGLFKSRSFVNFGLVKSYS 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01619 421 Pfam ACT domain 102 153 IPR002912 -
Spst2g01619 421 Pfam ACT domain 12 72 IPR002912 -
Spst2g01619 421 Pfam ACT domain 317 371 IPR002912 -
Spst2g01619 421 CDD ACT_ACR_2 100 173 - -
Spst2g01619 421 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 384 IPR040217 -
Spst2g01619 421 Gene3D - 96 167 - -
Spst2g01619 421 SUPERFAMILY ACT-like 96 167 IPR045865 -
Spst2g01619 421 CDD ACT_ACR_1 11 81 - -
Spst2g01619 421 SUPERFAMILY ACT-like 307 376 IPR045865 -
Spst2g01619 421 CDD ACT_ACR_3 231 305 - -
Spst2g01619 421 SUPERFAMILY ACT-like 8 76 IPR045865 -
Spst2g01619 421 ProSiteProfiles ACT domain profile. 311 387 IPR002912 -
Spst2g01619 421 ProSiteProfiles ACT domain profile. 13 92 IPR002912 -
Spst2g01619 421 ProSiteProfiles ACT domain profile. 101 188 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01619 Spst-Chr2 15099079 15101426 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01619 2 15099079 15101426 Spst2g01619 2 15099079 15101426 ECH