Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00865 ATGGCGGGTTTATTCTCACTAGGAGGAGGTAGAGGGAACACCAACAGCCAAGAGGAAATTACTCCTCCTCCTCCTGATACCTTATACTGGTATAACAACAACAAGAATGAAGATGTTTCCTCTTATCACCGAGGTGGTGGCTTTGAGCTATGGAACCAGCAGCAGTTACAACACCAACAACAACTCATGGGTCAGGGCCCTCCACAACCGCGTCCTCTCTTTCACCAAGATCTCTACTCCGCCTTGGGGGTTGGGCCCAGCAGGCCTATCTCTGATGATCAGTCGTCATCGAGATCCGGCTTCATGCTGGGAGGAAGTGGGAGTGGAAGCGGTGGAATTAGCTGTCAGGACTGCGGAAACCAAGCGAAGAAGGATTGCCCTCACATGCGGTGCAGGACATGCTGCAAGAGCCGTGGCTTCGATTGCCAAACTCATGTCAAGAGTACTTGGGTACCTGCTTCACGCCGTCGTGAGAGACAGCATCAACTCTCCACCCTGCAACAAAACATGGAAACTTCTGGAGACCTTCCCAAAAGGCAGAGAGATAGAGATCATAATAACCCCACCTCCTCTTCTCCTCTTGCCTGCACTCGTTTACCTTCGAACCCCTCCTCCTCAGGGTTAGAGGAGGTGAATTTTCCGGCTGTGGTGAGATCTTCTGCAGAATTCAGGTGCGTACGTGTGAGCTCCATGGATGACGCGGAGGACGAATATGCATACTCAACTGCTGTGAACATTGGAGGACATATGTTCAAAGGGATTTTATATGACTATGGTCCAGAAGGTAACAGTAGTTACGCCGGTGGTGCTGGTGAAAGCTCTTCCACTGGTGTTGGAGGGTTGAACCTCACTACTGGTGCCGTTGTCTCTGAGCCACTCCTTGATCCATCTTCTTCCTTGTATCCAGCTCCTCTTAACACTTTCATGCCTGGTAGCGGTACGCAATTCTTCCCTCACCCACGATCTTGA 969 0.5088 MAGLFSLGGGRGNTNSQEEITPPPPDTLYWYNNNKNEDVSSYHRGGGFELWNQQQLQHQQQLMGQGPPQPRPLFHQDLYSALGVGPSRPISDDQSSSRSGFMLGGSGSGSGGISCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVPASRRRERQHQLSTLQQNMETSGDLPKRQRDRDHNNPTSSSPLACTRLPSNPSSSGLEEVNFPAVVRSSAEFRCVRVSSMDDAEDEYAYSTAVNIGGHMFKGILYDYGPEGNSSYAGGAGESSSTGVGGLNLTTGAVVSEPLLDPSSSLYPAPLNTFMPGSGTQFFPHPRS 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00865 322 MobiDBLite consensus disorder prediction 85 106 - -
Spst2g00865 322 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 306 IPR007818 GO:0003700|GO:0006355
Spst2g00865 322 NCBIfam LRP1 C-terminal domain 213 260 IPR006511 -
Spst2g00865 322 MobiDBLite consensus disorder prediction 1 27 - -
Spst2g00865 322 NCBIfam putative zinc finger domain, LRP1 type 114 156 IPR006510 -
Spst2g00865 322 MobiDBLite consensus disorder prediction 89 106 - -
Spst2g00865 322 MobiDBLite consensus disorder prediction 187 208 - -
Spst2g00865 322 MobiDBLite consensus disorder prediction 152 208 - -
Spst2g00865 322 MobiDBLite consensus disorder prediction 9 27 - -
Spst2g00865 322 Pfam Domain of unknown function (DUF702) 112 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00865 Spst-Chr2 7305797 7307431 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Spst2g00865 DUF702 6.4e-64 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00113 9 884696 886364 Spst2g00865 2 7305797 7307431 ECH
Spst2g02567 2 25389835 25390829 Spst2g00865 2 7305797 7307431 ECH
Spst2g00865 2 7305797 7307431 Spst2g00865 2 7305797 7307431 ECH