Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02008 ATGGTGTTGATCAACGAAGAAATTGACCCCTACGTGCAAGAGGAAATCACTGAAGAAGAGAGCGAAGCTGAGAGCATCGACTATGACCAGCTGAAAAAACGCATGTGGAAGGATAGGATTCTGTTACAGAAGATGAAGGAGAAGCGTGACAAACAAGAGCCAGACATAGAAGCAAAACAGGAGGCATCGAGGAGGAAGAAGATGTCAAGAGCACAAGACTCGGTTCTCAAGTACATGGTGAAGATCATGGAAGTCTGCAACGCCCAAGGTTTTGTTTATGGCATTATCCCAGAAAAGGGAAAGCCCGTGTCTGGTTCCTCCGACAGCTTGCGCGAGTGGTGGAAGGACCAAATCCGCTTTGACCAAAGCGCCCCTAGTGCAATATCAAAGTACTTACCAATCTTTGAAAAGGATGAGATGGATATAACGTCTTATATTCACCTCCTCCAGGACTTGCAAGACTCTACTTTAGGTTCTCTCTTATCTGCTCTCCTGCAACATTGTGTCCCTCCACAAAGAAAGTTCCCTTTGGAGAGAGGGTTATCTCCCCCTTGGTGGCCCACTGGGGAGGAAGTTTGGTGGGGTGAGCAGGGCCTCCTTGCCCAAGAACATGGGCCACCACCTTATAGGAAGCCCCATGACTTGAAAAAGGCTTGGAAAGTTACTGTTCTGGCTGCAGTTATCAAACACATTTCACCTGATTTTGATAAACTGAGAAGGTTGGTGACTCAGTCCAAGACCTTGCAAGATAAGATGACAGCTAAGGATAGTGCTACTTGGTCCAAAGTCATGAACCAAGAAGAGATTTTACTAGCACTAACTGATAAGTGCCTTAAAATATCTCCTTCAAAGGAAAATGTTGAGAACCATGACGAGGGAGAAGGTTCTGGTTCTGCTCAAGTATTGAAGAGGAAGGGATCTTTTGGTGGTGCTAGTGGGGATGATAAGCTATATGCTTGTCAAAACGTCGAGTGTCCACAAAGTGAGTTGTCTATGGGGTTTGTGGATAAGAACGCGAGGTTGGACCACGAAGCTTTCTGTGTCTACCACAAAGAGGACAGCCATGTTCCATTTCACCGTTATCTCTCCAATGAAGCATCACCAATCACGAGTATAGATGATTGGATGAATGTGGCTATTCAAAATGATGCGAAGGTGGTAGAAGCTGCTGGTGGGAGTGGGACATTGGAAAATGACGCATGTTACTGGCTTAATGGAGTTGATAATCTTGAATTGCAAGCCGCACTAGAGATGTTAGTCAGAGATGACGGGGATTTTGCTCAAAACCCAATGCACGTTCTGCAGGGTCAAGAGGATGCAACCTCAATTTGGGACTTGCCATGCCATCCACCGCAAGAATAG 1362 0.4596 MVLINEEIDPYVQEEITEEESEAESIDYDQLKKRMWKDRILLQKMKEKRDKQEPDIEAKQEASRRKKMSRAQDSVLKYMVKIMEVCNAQGFVYGIIPEKGKPVSGSSDSLREWWKDQIRFDQSAPSAISKYLPIFEKDEMDITSYIHLLQDLQDSTLGSLLSALLQHCVPPQRKFPLERGLSPPWWPTGEEVWWGEQGLLAQEHGPPPYRKPHDLKKAWKVTVLAAVIKHISPDFDKLRRLVTQSKTLQDKMTAKDSATWSKVMNQEEILLALTDKCLKISPSKENVENHDEGEGSGSAQVLKRKGSFGGASGDDKLYACQNVECPQSELSMGFVDKNARLDHEAFCVYHKEDSHVPFHRYLSNEASPITSIDDWMNVAIQNDAKVVEAAGGSGTLENDACYWLNGVDNLELQAALEMLVRDDGDFAQNPMHVLQGQEDATSIWDLPCHPPQE 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02008 453 FunFam Ethylene insensitive 3-like 1 140 277 - -
Spst1g02008 453 MobiDBLite consensus disorder prediction 284 305 - -
Spst1g02008 453 FunFam Ethylene insensitive 3 family protein 57 138 - -
Spst1g02008 453 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 14 354 IPR006957 GO:0003700|GO:0005634
Spst1g02008 453 MobiDBLite consensus disorder prediction 46 68 - -
Spst1g02008 453 Pfam Ethylene insensitive 3 30 268 IPR047091 GO:0003700
Spst1g02008 453 SUPERFAMILY DNA-binding domain of EIN3-like 146 270 IPR023278 GO:0003700|GO:0005634
Spst1g02008 453 Gene3D - 138 276 IPR023278 GO:0003700|GO:0005634
Spst1g02008 453 Gene3D - 57 137 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02008 Spst-Chr1 28334622 28335983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02008 6 379 EIL Transcription Factor Family AT5G10120 52.538 7.78e-135 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Spst1g02008 EIN3 3e-114 No_clan