Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00608 ATGTCGTCCTCCACCGTCGTCGGCTCCGGCGCGGACACTCCCTCCTCATTCACGGCGACTCCCTCAAAAACACCTTCGTCGAAGGCAAGCAGCCGGCGGAGCCAGGCTGAGTTGAAGTCCCGGTTCGAGGCCTATAACCGGCTGCAGGGCGCTGCGGTGGCGTTTGGTGAGACGCTGCCGATCCCGGAGATCGTGGCGGTCGGGGGACAGTCGGACGGGAAGAGCTCGCTCCTGGAGGCGCTCCTCGGGTTCCGGTTCAACGTGCGCGAGGTTGAGATGGGGACTCGCAGACCCCTCATACTCCAGATGGTTCACGACGCCTCCGCTCTCGAGCCGCGATGCCGCTTCCAGGAGGAGGATTCAGAAGAGTATGGAAGTCCCGTAGTTTTGGCATCTGCAATTGCTGACATTATAAAGTCCCGAACGGAGGCACTTTTGAAGAAAACCAAGGCAGCAGTTTCTCCTAAGCCAATTGTAATGAGAGCTGAGTATGCACATTGTCCTAACCTTACTATTATTGACACACCTGGGTTTGTTCTTAAGGCAAAGAAGGGTGAGCCAGAGAACACACCCGATGAAATCCTTTCAATGGTAAAGTCCTTGGCCAGTCCTCCTCATCGTATACTCTTGTTCCTTCAGCAAAGTAGTGTTGAGTGGTGCTCCTCGTTGTGGTTGGATGTCATTCGTGAAATTGACCCAACATATAGACGGACAGTGATTGTTGTCTCCAAATTTGATAACCGTCTAAAGCAGTCTTGGCCACTTGATGTGTTGGTAGTAGTGGAATTTAGTGACCGTTGGGAAGTGGATCGCTATTTGAGTGCGAGTGGTTACCTTGGAGATAGCACTCACCCCTTTTTTGTGGCCCTTCCGAAGGATAGGGGTAATGTTTCAAATGATGAGTTCCGGAGGCAGATTTCTCAGGTGGACTCAGAGGTTCTTCGTCATCTACGTGAGGGCGTCAATGGAGGTTTCGATGAACAAAAATTTAAATCCTATATTGGCTTTAGCTGTCTAAGAGATTATTTGGAGTCTGAGCTTCAGAAGAAATACAAAGAAGCTACCCCAGCAACCCTGGCTTTGCTAGAGCAGCGCTGCAATGATGTGACTTCTGAACTTGCTAGAATGGATTCGAAAATACAGGCCACTTCAGATGTTTCCCATCTCAGGAAATTTGCAATGCTACATGCGGCTTCTATCAGCAACCATGTGGGTGCATTGATTGATGGTGCTGCAGATCCTTCGCCTGAGCAGTGGGGAAAAACAACAGTAGAAGAGAGGTCACAAAGTGGTATTGGGGTTTGGCCTGGTGTCATTGCCGATGTAAATCCCCCCAATGCTACTCTTCGTCTTTATGGAGGAGCTGCATTTGAGAGGGTGATGCATGAATTTCGCTGTGCAGCATATTCCATAGAATGCCCCTCAGTGTCTAGGGAGAAGGTTGCAAATATATTGCTTGCCCATGCCGGCCGAGGTGGGGCAAGAGGAATAACAGAGGCTGCTGCAGAGATTGCTCGGGCGGCTGCGAAATCATGGCTTGCTCCTCTTCTTGAAACTGCTTGTGACCGACTTGCTTTTGTCTTGGGATGTTTATTTGATTTGGCTCTAGAAAGAAACCGTAGTCAAGATTTAGAACGTGCGATTAAAGGGGGGAACATGGATGGTTATGTAGGTTTCCATGCTGCTTTAAGATGTGCTTACAATCGGTTCGTAGGAGATCTTGCTAAGCATTGCAAGCAGCTTGTGAGGCATCACGTTGATTCAGCTACTAGTCCATATTCACAGGTCTGCTACGTCAATGACCATGCACCCTCTTATAACAAATTCAACCAGGCTTCAGCCTCTTCGTTTTTCCTAGAGTTGAGTGATACTAGTTTAGCTTCCCACGATCCAAGGAGGGATCAGGAAAATATACCTCCAGAAAGCAATGCACAAGAAACCACACCAGGTAAAGCAGCAGAAACTAGAGATGCCTTGAGAGAAAGTCATATAACAATCCCTGAGACCCCATCTCCTGATCAACCAGGTGATGTAGCATATGGGGTGGTTAAAAAGGAGCTTGGAATTTTCAATGACGGGGGACCAAGAAAGAGAGCGTCCAGAATGGGAGGGAATAGCAAAAATTCTGACTATGTTAGACCGCAAAATGGTGGTGTTTTATTTGGAAATGGGGAGAGATCAGGTTCAGCTTACTCAGATATCTGTATAGCAGCTGCCCAGCATTTTGCGCGTATTCGTGAAGTTCTGGTCGAGAGAGGCGTGACATCAACATTAAATTCTGGATTCCTAACCCCTTGCCGAGAACGGTTATTCGTGGCTCTTGGGTTGGATTTATTTGCTGTGAACGATGAGAAATTCATGGATATGTTTGTAGCACCTGGTGCCATAGATGTGTTACAGGGTGAACGAGAGTCCCTCACGAAGCGGCAGAAGATACTCCAATCTTGCTTGAATGAGTTTAAAAATGTTGCTCGGGCACTTTGA 2484 0.4831 MSSSTVVGSGADTPSSFTATPSKTPSSKASSRRSQAELKSRFEAYNRLQGAAVAFGETLPIPEIVAVGGQSDGKSSLLEALLGFRFNVREVEMGTRRPLILQMVHDASALEPRCRFQEEDSEEYGSPVVLASAIADIIKSRTEALLKKTKAAVSPKPIVMRAEYAHCPNLTIIDTPGFVLKAKKGEPENTPDEILSMVKSLASPPHRILLFLQQSSVEWCSSLWLDVIREIDPTYRRTVIVVSKFDNRLKQSWPLDVLVVVEFSDRWEVDRYLSASGYLGDSTHPFFVALPKDRGNVSNDEFRRQISQVDSEVLRHLREGVNGGFDEQKFKSYIGFSCLRDYLESELQKKYKEATPATLALLEQRCNDVTSELARMDSKIQATSDVSHLRKFAMLHAASISNHVGALIDGAADPSPEQWGKTTVEERSQSGIGVWPGVIADVNPPNATLRLYGGAAFERVMHEFRCAAYSIECPSVSREKVANILLAHAGRGGARGITEAAAEIARAAAKSWLAPLLETACDRLAFVLGCLFDLALERNRSQDLERAIKGGNMDGYVGFHAALRCAYNRFVGDLAKHCKQLVRHHVDSATSPYSQVCYVNDHAPSYNKFNQASASSFFLELSDTSLASHDPRRDQENIPPESNAQETTPGKAAETRDALRESHITIPETPSPDQPGDVAYGVVKKELGIFNDGGPRKRASRMGGNSKNSDYVRPQNGGVLFGNGERSGSAYSDICIAAAQHFARIREVLVERGVTSTLNSGFLTPCRERLFVALGLDLFAVNDEKFMDMFVAPGAIDVLQGERESLTKRQKILQSCLNEFKNVARAL 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00608 827 CDD DLP_1 59 356 IPR001401 GO:0003924|GO:0005525
Spst11g00608 827 FunFam Dynamin-related protein 5A 30 407 - -
Spst11g00608 827 Coils Coil 359 379 - -
Spst11g00608 827 Gene3D - 40 404 IPR027417 -
Spst11g00608 827 Pfam Dynamin family 64 244 IPR045063 -
Spst11g00608 827 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 58 356 IPR030381 GO:0005525
Spst11g00608 827 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 364 IPR027417 -
Spst11g00608 827 PRINTS Dynamin signature 214 232 IPR022812 -
Spst11g00608 827 PRINTS Dynamin signature 61 79 IPR022812 -
Spst11g00608 827 PRINTS Dynamin signature 86 103 IPR022812 -
Spst11g00608 827 PRINTS Dynamin signature 164 181 IPR022812 -
Spst11g00608 827 PRINTS Dynamin signature 233 249 IPR022812 -
Spst11g00608 827 SMART dynamin_3 38 271 IPR001401 GO:0003924|GO:0005525
Spst11g00608 827 MobiDBLite consensus disorder prediction 1 33 - -
Spst11g00608 827 MobiDBLite consensus disorder prediction 628 658 - -
Spst11g00608 827 PANTHER DYNAMIN 43 821 IPR022812 -
Spst11g00608 827 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00608 Spst-Chr11 28235900 28242566 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00608 11 28235900 28242566 Spst11g00608 11 28235900 28242566 ECH