Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00528 ATGGAAGGTGATGCAGCAACGATGTTGTGTGTTGGATTGTTGGTTGCATTCGTTATCGTATTCCTAACAAAAGCACTGCGTTGGGTGTGGCTGGAGCCGAAAAGTGCAGAGAGATTCCTCCGAAGACAAGGCCTGAAAGGAAACTCATACACGCTTTTCTTCGGAGATATCAAAACTATGGCCACGATGCTGCGTGAAGCAAAATCTAAACCCTTAGACATCAACGATGATATTGCTCCTCGCCTAGGTCCATTTCAACATCAACTGGTAAAAGATTGTGGGAAGGATTCGTTTTTTTGGTATGGCCCGAAGATTACAGTGAATATTATGGACCCAGAAGGAATAAAAGAGGTTCTGAATGTGATAAGTGACTATCCGAAGCCGTCCCTTAATCCACTTGCTAAGCTCCTCATAACAGGACTTGTAGACCTTGATGGAGAGAAATGGTCAAAGCACAGAAAGGTCATCAACCCTGCATTTAATCTCGTCAAGCTCAAGCATGTGTTGCCAGCCATGTTTCATAGTTGTAACCAGATGATGAACGAATGGAAGATGTTACTATCGAAAACAGGATCATGCGTGGTAGATGTTTGGCCATTCTTGAATAACCTCTCAGCTGATGTGATTTCTCGTACAGCTTTCGGAAGCAGCTATGAAGAGGGAAAAATAGTATTTGAACTCCTGAAAGAACAAGCTCAACTTACAGCCAAGGTCCTACAATCTGTTTATATTCCAGGATGGAGGTTTCTACCAACTAGATTGAACAAAAGGATGAAGAAGATTGACCATGAAATTGGAAATGTACTTAGTGGAATTATCCAAAAGCAGGAAGCTATTATGAAGACATGCGAAGCTCCAAATAACCTACTAGGGTTACTATTGGAGTCCAATCAAAAAGAGATTGAAGATCTTGGACTTAAAAAGGATGTTGGAATGAACACTGATGATGTCATTAACGAGTGTAAGTTATTCTACTTTGCTGGACAAGAAACAACGTCGGTGCTACTAAATTGGACAATGGTGTTATTAAGTAGGTTTCCCAAGTGGCAAACCCTAGCAAGAGAAGAGGTCATTGAAACTTTTGGCACACAAGAACCAGACTATGATGGATTAAATCGTCTAAAAGTTGTCACAATGATTTTGTACGAGGTTCTAAGATTATATCCACCAGTTACTGCTATTACAAGAGTCGTAAAGAAGGAAGCTAAAGTTGGAAATTTGACTTTACCAGAAGGAGCATTAGCTACTATTCCAATCGTGTTGGTACACCATGATTTTGAATTATGGGGCAGTGATGCAAAAGAGTTCAAACCAGAGAGATTCTCTGAAGGAATCTTGAAAGCAACAAAGGGTCAAGTTTCATTTCTGCCATTTGGATGGGGTCCTCGAATATGCATTGGGCAAAACTTTGCTTTGCTTGAAGCCAAAATGGCTTTGTCTTTGATTCTGCAGAACTTTTCGTTTGAGCTATCCTCGTCATATGTTCATGCTCCAACTACAGTTATTACTGCTCAACCTCAATTTGGCACGTCTATTGTATTACAAAAATTATAG 1554 0.4035 MEGDAATMLCVGLLVAFVIVFLTKALRWVWLEPKSAERFLRRQGLKGNSYTLFFGDIKTMATMLREAKSKPLDINDDIAPRLGPFQHQLVKDCGKDSFFWYGPKITVNIMDPEGIKEVLNVISDYPKPSLNPLAKLLITGLVDLDGEKWSKHRKVINPAFNLVKLKHVLPAMFHSCNQMMNEWKMLLSKTGSCVVDVWPFLNNLSADVISRTAFGSSYEEGKIVFELLKEQAQLTAKVLQSVYIPGWRFLPTRLNKRMKKIDHEIGNVLSGIIQKQEAIMKTCEAPNNLLGLLLESNQKEIEDLGLKKDVGMNTDDVINECKLFYFAGQETTSVLLNWTMVLLSRFPKWQTLAREEVIETFGTQEPDYDGLNRLKVVTMILYEVLRLYPPVTAITRVVKKEAKVGNLTLPEGALATIPIVLVHHDFELWGSDAKEFKPERFSEGILKATKGQVSFLPFGWGPRICIGQNFALLEAKMALSLILQNFSFELSSSYVHAPTTVITAQPQFGTSIVLQKL 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00528 517 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst11g00528 517 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst11g00528 517 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst11g00528 517 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst11g00528 517 PANTHER CYTOCHROME P450 FAMILY MEMBER 22 509 - -
Spst11g00528 517 CDD CYP72 84 513 - -
Spst11g00528 517 FunFam Cytochrome P450 734A1 30 517 - -
Spst11g00528 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Spst11g00528 517 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst11g00528 517 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst11g00528 517 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst11g00528 517 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst11g00528 517 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst11g00528 517 Gene3D Cytochrome P450 78 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst11g00528 517 SUPERFAMILY Cytochrome P450 82 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst11g00528 517 Pfam Cytochrome P450 89 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00528 Spst-Chr11 27232953 27235439 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00528 1 517 Cytochrome P450 AT3G14690 55.684 0.0 597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00528 11 27232953 27235439 Spst11g00528 11 27232953 27235439 ECH