Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00523 ATGATGGAATGCAAGAGGATAGGTTTTGACATATGTCTCTCATCCCTCTTCTCATTCTCCACCTCCTCAAGCCTTGACAATGGTGGGATTGGTGTTTACTGGGGCCAAGACATTCGCGAAGGCAAGTTGAACACAACGTGCGACACTGGAAATTATGCGGTTGTGCTATTAGCTTACCTACGCCAATTCGGCGATGGCAGAAACCCGTTTTGGGACTTCATCGGCCACGACGACGGTGTGGTAGCGTCCCAGATAAAACACTGCCAGGCCAAAGGCGTCAAAGTGTTCCTCTCCATCGGAGGACCCATCACGTTTTACGAGTACTCCCTCAACTCCACCGAGGATGCAAAGCGCTTCGCCAACTACCTCTACACCAGGTTTCTCAGTGGCCGATTTGGTCCAATCGGAAGGGTGGAGTTGGACGGCATAGAGTTCCACATCAGAGCCACAGAGGATCACTGGGATGACCTTGTCAAAGAACTCGACTTTTTCCGACGCACCAAAGGCCGATACTTTCACTTGGTTGCTGCCCCTCGGTGTCAAATCCCAGTTCACAATCTTGGGAAAGCCATAGCAACCAAACTTTTCGACCACATCTTCGTTCAGTTCTACAATGACCCCTCTTGCGAATTGTTTCTGTCGTGGGACAAGTGGGTGAACTTGGCTCCGCCCAACAGCAACATCTTCCTGGGGCTGCTATCGTCGATTACTGCAGGGGCAACTGGGTACGTTAGGCCCCATATAGTGAATCGTGAAGTGCTTCCGCATGTGAAGAAAGCCTCCAACTATGGAGGAGTGATCCTGTGGAATAGATATCGTGATATTGTATGGAACTTCAGCGGCAAAATACTCCCCAATGTGCCCAAATCCATCTTACTCTCGTCTGTGTCTTGA 894 0.5022 MMECKRIGFDICLSSLFSFSTSSSLDNGGIGVYWGQDIREGKLNTTCDTGNYAVVLLAYLRQFGDGRNPFWDFIGHDDGVVASQIKHCQAKGVKVFLSIGGPITFYEYSLNSTEDAKRFANYLYTRFLSGRFGPIGRVELDGIEFHIRATEDHWDDLVKELDFFRRTKGRYFHLVAAPRCQIPVHNLGKAIATKLFDHIFVQFYNDPSCELFLSWDKWVNLAPPNSNIFLGLLSSITAGATGYVRPHIVNREVLPHVKKASNYGGVILWNRYRDIVWNFSGKILPNVPKSILLSSVS 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00523 297 Pfam Glycosyl hydrolases family 18 30 237 IPR001223 GO:0005975
Spst11g00523 297 CDD GH18_hevamine_XipI_class_III 28 285 IPR045321 -
Spst11g00523 297 PANTHER ENDOCHITINASE 19 283 - -
Spst11g00523 297 Gene3D Glycosidases 25 283 - -
Spst11g00523 297 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 28 287 IPR001223 GO:0005975
Spst11g00523 297 SUPERFAMILY (Trans)glycosidases 26 283 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00523 Spst-Chr11 27194557 27197909 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00523 18 287 Glycoside Hydrolase AT5G24090 40.767 5.63e-70 217
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00523 11 27194557 27197909 Spst11g00523 11 27194557 27197909 ECH