Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00516 ATGATGGAATGCAAGAGGATAGGTTTTGCCATATGTCTCTCATCCCTCTTCTCATTCTCCACCTCCTCAAGCCTTGACAATGCTGGGATTGGCGTTTACTGGGGCCAAGACATTCGCGAAGGCAAGTTGAACACCACGTGCGACACTGGAAATTATGCGATTGTGCTCTTAGCTTACCTCCGCCAATTCGGCGATGGCAGAAACCCGTTTTGGGACTTCATCGGCCACGACGACGGTGTGGTAGCGTCCCAGATAAAACACTGCCAGGCCAAAGGCGTCAAAGTGTTCCTATCCATCGGAGGACCCATCACGTTTTACGAGTACTCCCTCAACTCCACCGAGGATGCAAAGCGCTTCGCCAACTACCTCTACACCAGCTTTCTCAGTGGCCGATTTGGTCCAATCGGAAGAGTGGAGTTGGACGGCATAGAGTTCCACATCAGAGCCACAGAGGATCACTGGGATGACCTTGTCAAAGAACTCGACTTTTTCCGACGCACCAAAGGCCGATACTTTCACTTGGTTGCTGCCCCTCGGTGTCAAATCCCAGTTCACAATCTTGGGAAAGCCATCGCAACCAAACTTTTCGACCACATCTTCGTTCAGTTCTACAACGACCCCTCTTGTGAATACAACATTGAGGACGGCACCAAGCCCTTGTTGGACTCGTGGGACAACTGGGTCAACTTGGTCGCGTCTAATAACTCGCTGTTCCTGGCCCTGCCAGCGGACTCAAGTGAAGAAGAAAGTGGTTTCGTGGAACCGGATGTGGTGAATCTTGAGGTGCTTCCGCATGTGAAGAAAGCCACCAACTATGGAGGGGTGATTCTGTACAACAGATATCGTGATATTATAAGGAATTTCAGCGGCGAGATACTGCCCAATGTGCCCAAATCCTCTTTCTTCTTGAACACAATGGGTCCTGTCTTTCCCTATTTTGGGTAA 945 0.5026 MMECKRIGFAICLSSLFSFSTSSSLDNAGIGVYWGQDIREGKLNTTCDTGNYAIVLLAYLRQFGDGRNPFWDFIGHDDGVVASQIKHCQAKGVKVFLSIGGPITFYEYSLNSTEDAKRFANYLYTSFLSGRFGPIGRVELDGIEFHIRATEDHWDDLVKELDFFRRTKGRYFHLVAAPRCQIPVHNLGKAIATKLFDHIFVQFYNDPSCEYNIEDGTKPLLDSWDNWVNLVASNNSLFLALPADSSEEESGFVEPDVVNLEVLPHVKKATNYGGVILYNRYRDIIRNFSGEILPNVPKSSFFLNTMGPVFPYFG 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00516 314 Gene3D Glycosidases 27 294 - -
Spst11g00516 314 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 28 295 IPR001223 GO:0005975
Spst11g00516 314 CDD GH18_hevamine_XipI_class_III 28 294 IPR045321 -
Spst11g00516 314 PANTHER ENDOCHITINASE 15 291 - -
Spst11g00516 314 Pfam Glycosyl hydrolases family 18 30 226 IPR001223 GO:0005975
Spst11g00516 314 SUPERFAMILY (Trans)glycosidases 26 292 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00516 Spst-Chr11 26977147 26978167 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00516 18 296 Glycoside Hydrolase AT5G24090 41.319 6.30e-74 228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00516 11 26977147 26978167 Spst10g00891 10 9666066 9667019 ECH
Spst11g00516 11 26977147 26978167 Spst11g00516 11 26977147 26978167 ECH