Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Spst11g00486 | ATGCTGGCCAGTGATCCTGCGAAAAAAAATTCGTTTAATCGGTCCATCAATAATGGTGATTTGGTTATTGTTTATGAAAGGCATGACAACATGAAGGCTGTAACGGTGTCTGAGGGGACAGTCCTGCAGAACCGATTTGGTATTTTTAAGCATTCAGACTGGCTTGGAAAGCCATTTGGGTCCAAAGTTTTCAGCAACAAGGGTGGTTATGTGTACTTGTTGTATCCTACACCAGAATTGTGGACGCTTGTTTTAAGCCACAGGACTCAGATTCTATATATTGCTGATATTAGCTTTGTTGTCATGTACTTGGAGATTGTTCCTGGTTGCTTGGTTCTTGAATCTGGAACTGGAAGTGGATCATTAACTACTTCACTGGCAAGGGCAGTGGCTCCTACCGGACATGTCTATACATTTGATTTCCATGAGCAAAGGGCTGGATCAGCTAGGGATGATTTTGAGAGGACTGGTCTAAGCAACTTAGTCACTGTGAGAGTCAGGGATATTCAGGGCGAGGGATTTCCTGATGAGTTCACTGGCTTGGCTGATGCGGTATTTTTGGATCTACCTCAGCCTTGGCTAGCTGTTCCTTCAGCTGCAAAAATGTTGAAAGAAGATGGCACATTGTGTTCATTCTCCCCATGCATTGAACAAGTTCAACGTTCATGTGAAGTGCTTCGAACCAGCTTCACTGATATAAGGACTTTTGAGGTACTTCTCCGCGCGTATGAAGTTCGAGAAGATAAACTGGAAAGCATAGAGGGGAATGGTGATGGCTCTAATGGTTCACTTCCTTGCAAGAGGAGACAGTGTTCAGATGGTGGCAATGTGATGAGTAGTCCTATTTCATCTGTTATGGCTAGACCATGCATTGAAGCTAGAGGTCACACGGGCTATCTCACATTTGCAAGACTTAGATGTCTCATATGA | 930 | 0.4387 | MLASDPAKKNSFNRSINNGDLVIVYERHDNMKAVTVSEGTVLQNRFGIFKHSDWLGKPFGSKVFSNKGGYVYLLYPTPELWTLVLSHRTQILYIADISFVVMYLEIVPGCLVLESGTGSGSLTTSLARAVAPTGHVYTFDFHEQRAGSARDDFERTGLSNLVTVRVRDIQGEGFPDEFTGLADAVFLDLPQPWLAVPSAAKMLKEDGTLCSFSPCIEQVQRSCEVLRTSFTDIRTFEVLLRAYEVREDKLESIEGNGDGSNGSLPCKRRQCSDGGNVMSSPISSVMARPCIEARGHTGYLTFARLRCLI | 309 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Spst11g00486 | 309 | Gene3D | Vaccinia Virus protein VP39 | 78 | 307 | IPR029063 | - | |
| Spst11g00486 | 309 | PIRSF | GCD14 | 10 | 307 | IPR014816 | GO:0016429|GO:0030488|GO:0031515 | |
| Spst11g00486 | 309 | PANTHER | TRNA (ADENINE(58)-N(1))-METHYLTRANSFERASE | 4 | 306 | IPR014816 | GO:0016429|GO:0030488|GO:0031515 | |
| Spst11g00486 | 309 | FunFam | tRNA (adenine(58)-N(1))-methyltransferase | 7 | 77 | - | - | |
| Spst11g00486 | 309 | CDD | AdoMet_MTases | 112 | 209 | - | - | |
| Spst11g00486 | 309 | Pfam | tRNA methyltransferase complex GCD14 subunit | 69 | 304 | IPR014816 | GO:0016429|GO:0030488|GO:0031515 | |
| Spst11g00486 | 309 | FunFam | tRNA (adenine(58)-N(1))-methyltransferase | 78 | 307 | - | - | |
| Spst11g00486 | 309 | ProSiteProfiles | tRNA (adenine(57)-N(1)/adenine(58)-N(1) or adenine(58)-N(1)) (EC 2.1.1.219 or EC 2.1.1.220) family profile. | 19 | 306 | IPR014816 | GO:0016429|GO:0030488|GO:0031515 | |
| Spst11g00486 | 309 | Gene3D | - | 10 | 77 | - | - | |
| Spst11g00486 | 309 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 15 | 305 | IPR029063 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Spst11g00486 | Spst-Chr11 | 26643110 | 26644787 | Dispersed |