Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00476 ATGCCATATCTCTTGTGCAAGGTTTATTCTGATATATCCGAAAGTGCTCCTTTTCTTGTCATTGATGATAGTAAGAGAATCCATTTGTTACCAGTTCTTCTCTTACATGAAGAAGCCCCTGATACTGGCAACATAAATTCGTGGGCTGAAGTTCCACATGCAACTGTTGATTTTAAGTTTCCTTTGGAAAAATGGGTTCATGTTGGATGTCAGGTTTGTCCAGATTTTATCCAGCTTTGGATTAATGGAGAGATTTTAGGAGAAAAGTCTGTGTGTTCCATATCAAATGAGGAATCTGGTTCAAGTGATTTGAAGAAATTAACGCTGGCAAATGTTGGTGGAGATGGAAATAGTGTGCAGGGTTATGTGCACAATTTTCAAATATTTCCTGTTATCTCTTCTATTTCGGATTACCATTTAAAGGACCCTCCTTTCAAGTTATCAATTGATGAATCATCTGTCTCTGAGATTGAAGAAGAAAGTGATGGTGTTTGGGGTGTTGTTGGTGGCAAGGCATCTTGTCGTAGGAACTTCTCTTTGGACGTTGTTCTGTCAGATGCTTTTGGACAGCCTGTAGATAAGGAGAATGAGGTTTTTGCTTCACTTTTGTATGCTGACACCAGAGCACCAGTGGAGAATACAACTGATGATGAAGCGCCCCTTTTAGCTAGTTATGATGGAATAGAGTTTTCTTCTTGTGAAAGACCAAGTAAACTTTTGCTGGGACGTGCTTCATTTAAGCTCAAAATATCTCAGCTTTCATCCAAGCGTGATAACAGGTTCTTCCTCATCAGATTTTGTGTTCCAAAACTAGGAAATTATCCTTTCCTTGAGACATACTCCCGACCAATTCGATGCATCTCTAGAAGTCGTAACACAAGATTGTCCTCTCTAGTGTGGAAAAGGTCAACTGCTATTAATTGCCCTAGTGTATCTCAATCTTCAGCTTTGGATGATGGGTCTATGGAAATTCAGCATTCAGGTCATGAAGCACAAGCCAATCCAGTGATGAAGCGGTCTAGACTTGGACAAGACAAGATATCTGTATCAGTGAAGACTGACCCCACCATTGAGCAACCTGATGAAGAATGTAACTCTCATGTCCGGACTTCTAACCAGGTTGAAAATGGATTTCCAACAAGCTTCGATGGAAAGCCTGCAAACTTCAGTGAAGCATATGATTCTCCATCTGATTCAGAGAGTATAGGGGAGGGAAATTCACCATTAAATAGTTTGGCAAGTAGAAGATATCCAATATCTGACATGACCATTTTCAAATACTGCCTTGCGAGTTTGGCTGAGAGATCTCTCATACTTAAGGAAATTGCTACCTCTGCTTCTGACATAGAAATTTTAGAAATGGCTAATCATGTGTCAATCTATTCAGGATGTTCGCACCATGGAAACCAAATATTAATTGCCAAGAGATTGATAGAGGACGGAACTAATCTTTGGAAGTTGATGTCTCCAAACAATCAACACATTCATTGGGACAATGCAGTGTACGAGATTCAAGAGCAATTCATGAAGATTGCTTCTAGCGGTTCAAGATCTCTCTCACCTCAGGATCTAAATCTTTTGAGAAGGATCGCTGGATGTCAAGAGTACCTAACACAAGCGAACTTCGAGAAGTTGTGGTGTTGGTTGTACCCTGTGGCAATTATAATATCAAGGGACTGGATAAATCCTGTCTGGAATTCCGCATCACCTAAGTGGATAGAAGGGTTCATAACTAAGGAGGAGGCAGAAGCTTCACTACAAGGTCCCACCGGATTTCAAGCACCAGGTACCTTTATACTCAGATTTCCTACCTCGAGAAGCTGGCCACACCCAGATGCTGGTAGCCTAGTTGTAACCTATGTTGGCAATGACTACAAACTGCACCACAGGCTACTTTCTTTGCATCATGTTTATGGCTCTGGTGATGAAAGAGTTGACATGAAACCGCTTCAAGATATGCTATTGGCAGAACCTGAGCTGTCTCGATTGGGAAGGATAATAAGAAGTCATTAG 2013 0.4098 MPYLLCKVYSDISESAPFLVIDDSKRIHLLPVLLLHEEAPDTGNINSWAEVPHATVDFKFPLEKWVHVGCQVCPDFIQLWINGEILGEKSVCSISNEESGSSDLKKLTLANVGGDGNSVQGYVHNFQIFPVISSISDYHLKDPPFKLSIDESSVSEIEEESDGVWGVVGGKASCRRNFSLDVVLSDAFGQPVDKENEVFASLLYADTRAPVENTTDDEAPLLASYDGIEFSSCERPSKLLLGRASFKLKISQLSSKRDNRFFLIRFCVPKLGNYPFLETYSRPIRCISRSRNTRLSSLVWKRSTAINCPSVSQSSALDDGSMEIQHSGHEAQANPVMKRSRLGQDKISVSVKTDPTIEQPDEECNSHVRTSNQVENGFPTSFDGKPANFSEAYDSPSDSESIGEGNSPLNSLASRRYPISDMTIFKYCLASLAERSLILKEIATSASDIEILEMANHVSIYSGCSHHGNQILIAKRLIEDGTNLWKLMSPNNQHIHWDNAVYEIQEQFMKIASSGSRSLSPQDLNLLRRIAGCQEYLTQANFEKLWCWLYPVAIIISRDWINPVWNSASPKWIEGFITKEEAEASLQGPTGFQAPGTFILRFPTSRSWPHPDAGSLVVTYVGNDYKLHHRLLSLHHVYGSGDERVDMKPLQDMLLAEPELSRLGRIIRSH 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00476 670 MobiDBLite consensus disorder prediction 392 410 - -
Spst11g00476 670 MobiDBLite consensus disorder prediction 342 410 - -
Spst11g00476 670 ProSiteProfiles Src homology 2 (SH2) domain profile. 572 670 IPR000980 -
Spst11g00476 670 Gene3D SH2 domain 558 668 IPR036860 -
Spst11g00476 670 PANTHER SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 13 661 IPR001217 GO:0003700|GO:0006355|GO:0007165
Spst11g00476 670 SUPERFAMILY SH2 domain 567 654 IPR036860 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF STAT Spst11g00476 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00476 11 25818244 25833599 Spst11g00476 11 25818244 25833599 ECH