Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00455 ATGTTGAGGGCTAAACTACATAAACTTCTTGCTTTTATGTGCTTGTGGTTGTGGTGGAGTGCTTGTATTTATGTTGATGCAGCAGGTGACAGTTTAAAGGCCGGCGATACAATGAATTTCTCTTCAGCACTACATTCTAAGAGTCGCAAATATTTTCTAGAGTTTTATTTGCTAGGGAAGTCATCTAATTATTATTTGGGAATACAAAAAGCATATGACAATTTTATAGTTTGGACAGGTAACAGAGAAGAATCTATCTACCAGACTGATGCAGTTCTATCACTAAACTTCTCTGGCGTGCTGAAAATAGAATCTCAAATAGATAAGAAACGAATTATCCTTTATTCTCCTCCTCAACCTATCAACAACACTATGGCCACTTTGTTGGACACAGGCAACTTCGTGCTTCAACAAGTTCACCCCAATGGGACTAACACTCTCTTGTGGCAGAGTTTTGATTATCCAACCGACTTTTTGCTCCCCACCATGAAGTTAGGTGTTAATCACAAAACAGGCCATCACTGGTCACTGGTGTCATGGGTGACCAATGAGCGTGTGGCTCCAGGTGCCTTCAGTCTTGAATGGGAACCGGCGGGACAAGAACTGTTCATAAGGAGACGAGGAAAGGTTTGTTGGCGAAGTGGGAAATTGAGGAGCAATAGATTTGAGCACATTCCAGAAGATGCACAACGCGTGTTGAAGTACAGCATAGTGTCTAACCAGGATGAAGACTCTTTCTCCTTTACATCTACAAATGAAAATCATACACGGTGGTGGTGCCTTTCGAGTAAAGGGCAGTTATCTTACAATAACGAAGAAGGATATGTTGCAAGGGCTGATCTGTGTTATGGATATAACAACAGTGATGGAGGGTGCCAAAGATGGCAGGAAATACCTATGTGCAGGAATCCTGGTGATGTGTTTACCAAAAAGATTCTTCACCCCAATTATGACGATGCAATCTATGATCTAAATTACAATATTAGTTACAGTGATTGTGAGGCCAGTTGCTGGAGCAATTGTTCTTGCAATGGATTCAAAGAATTCTTTTCTGATGGAACTGGATGTAAATTCTATCATTGGAATTCATCCGAAAATTATACTATTGACAGTACTGTTTTTGGTGTAGACTTTTACATACTGGAGAACATAGGAAACATAGCCCCGCATCATCACGGTAGGTCTAATGCCAACTTCCTCCTATTCTATGCAGGTACAGAAAGGTGGATATGGATAAGTCCAGTAATAGCAACTGCTGTGATAATATGCGTATCCATTCTATGCCTAGCCATAAAGAAACGAAAATATGTGCATCAAGAGAAGAAAAGGAAAGAAATGGTTATGAAAATGCAGAAGTCAGAAACTTGTGACGGGTTATCTCCAATCAAAGATTTTGGAAATGGTTTTAGAAAGGGACACGATTTAGAAGAGTTCGATTATACATTGGTTGTGACGGCTACAAATGGATTTTCATCTGAAAATAAGTTAGGACAGGGAGGTTTTGGACCAGTTTATAAGGGGATTTTGCCAATAGGAAAGGAGGTCGCTGTAAAAAGACTCTCAAAAAGTTCTGCGCAAGGAATTGTGGAGTTTAAGAATGAACTAACACTTATATCTGAACTTCAGCATATGAATCTTGTTCAACTACTTGGTTGTTGCATTCATGAAGAAGAGAAGATTCTAATTTACGAGTATATGGCGAACAAAAGCTTGGATTTCTATATTTTCG 1729 0.3944 MLRAKLHKLLAFMCLWLWWSACIYVDAAGDSLKAGDTMNFSSALHSKSRKYFLEFYLLGKSSNYYLGIQKAYDNFIVWTGNREESIYQTDAVLSLNFSGVLKIESQIDKKRIILYSPPQPINNTMATLLDTGNFVLQQVHPNGTNTLLWQSFDYPTDFLLPTMKLGVNHKTGHHWSLVSWVTNERVAPGAFSLEWEPAGQELFIRRRGKVCWRSGKLRSNRFEHIPEDAQRVLKYSIVSNQDEDSFSFTSTNENHTRWWCLSSKGQLSYNNEEGYVARADLCYGYNNSDGGCQRWQEIPMCRNPGDVFTKKILHPNYDDAIYDLNYNISYSDCEASCWSNCSCNGFKEFFSDGTGCKFYHWNSSENYTIDSTVFGVDFYILENIGNIAPHHHGRSNANFLLFYAGTERWIWISPVIATAVIICVSILCLAIKKRKYVHQEKKRKEMVMKMQKSETCDGLSPIKDFGNGFRKGHDLEEFDYTLVVTATNGFSSENKLGQGGFGPVYKGILPIGKEVAVKRLSKSSAQGIVEFKNELTLISELQHMNLVQLLGCCIHEEEKILIYEYMANKSLDFYIF 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00455 576 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Spst11g00455 576 Pfam PAN-like domain 303 360 IPR003609 -
Spst11g00455 576 ProSiteProfiles Bulb-type lectin domain profile. 29 149 IPR001480 -
Spst11g00455 576 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 183 IPR036426 -
Spst11g00455 576 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 462 565 - -
Spst11g00455 576 Pfam Protein tyrosine and serine/threonine kinase 493 574 IPR001245 GO:0004672|GO:0006468
Spst11g00455 576 SUPERFAMILY Protein kinase-like (PK-like) 475 575 IPR011009 -
Spst11g00455 576 Gene3D - 22 152 IPR036426 -
Spst11g00455 576 Gene3D Phosphorylase Kinase; domain 1 466 565 - -
Spst11g00455 576 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 23 575 - -
Spst11g00455 576 ProSiteProfiles Protein kinase domain profile. 490 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00455 576 Pfam D-mannose binding lectin 76 180 IPR001480 -
Spst11g00455 576 SMART blect_4 35 155 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00455 Spst-Chr11 25381167 25383775 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00455 472 576 Receptor kinase-like Gene Family AT4G04500 61.905 9.81e-36 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst11g00455 B_lectin 5.9e-25 No_clan