Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Spst11g00454 | ATGTCGCCGGAATATGCCACCGAAGGAGTTTTTTCTACAAAGTCTGATGTGTACAGCTTTGGAGTGTTGTTACTTGAAATTGTTTGTGGAAGAAAAAACACGTGTTTTTATGATGATGAACGCCCATTAAATCTAGTTGGACATGTATGGGAATTGTGGAAAGATGGAAAGTGTTTGGAATTAGTGGATCCATCATTGGAGGAGTTATTAGATGGTGATGAAGTGCAGAGGTCATGTTGGTCTCTTGTGCGTTGA | 255 | 0.4 | MSPEYATEGVFSTKSDVYSFGVLLLEIVCGRKNTCFYDDERPLNLVGHVWELWKDGKCLELVDPSLEELLDGDEVQRSCWSLVR | 84 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Spst11g00454 | 84 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 84 | - | - | |
| Spst11g00454 | 84 | ProSiteProfiles | Protein kinase domain profile. | 1 | 84 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Spst11g00454 | 84 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 67 | IPR011009 | - | |
| Spst11g00454 | 84 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 1 | 80 | - | - | |
| Spst11g00454 | 84 | Pfam | Protein tyrosine and serine/threonine kinase | 1 | 51 | IPR001245 | GO:0004672|GO:0006468 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Spst11g00454 | Spst-Chr11 | 25331195 | 25331526 | Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Spst11g00454 | 1 | 77 | Receptor kinase-like Gene Family | AT4G11480 | 61.538 | 7.94e-28 | 102 |
Transcription factors information