Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00453 ATGTGGTTGTGGTTGTGGTGGAGTACTTCTACTCATGTTCAAGCAGCAGATGACAGTTTAAAGCCCGGTGATACACTGAATTTCTCTTCACCACAACTATATTCTCAGAGTGGCAAATATTTTCTACATTTTTATTCGATAGCGGATGAGGCATCTATTGATACTTACATGGCAATATATAGTGCATATGACAATAGCATAGTCTGGAAGGGCAACAGAGAACAATCTGTGGACCAAACTGATGCAGTTCTATCACTAAACTTCTCTGGCGTGCTGAAAATAGAATCTCATTTTTTGGAAAAGCCAATTATTCTTTACTCTCCTCCTCAACCAATCAACAACACTATGGCAACTTTGTTGGACACAGGCAACTTTGTCCTTCAACAACTTCACCCCAATGGGACAAAAACTCTCTTGTGGCAGAGTTTTGATTATCCCACCGACACTTTGCTCCCCACCATGAAGTTAGGCGTTAATCACAAAACAGGCCATCATTGGTTACTGGTTTCACAGTTGACCCAAATGCATGCGACTCCAGGTGTCTTCAGTCTTGAATGGGAACCAACGGGACAAGAAATGATCATAAGGAGACGGGGAAAAGTTTGTTGGCGAAGTGGGAAATTTAGGAACAATAGATTTGAGAACATTCCGGAGGATGCACAACGCGTGTTGAAGTACAGCATAGTGTCTAATGAGGATGAAGACTCCTTCTCCTTCATATCTAAAAATGAAAATCATACACGGTGGTGGTTCCTATCGGATACTGGGCAGTTATCTCACAATCAAGGTTATGTTGTAAGGGCTGATCTTTGTTATGGATATAACAACGATGGAGGGTGCCAAAGGTGGCAGGATATACCTAAGTGCAGGAATCCTGGTGATGTGTTTACCAAAAAGATGCTTTACCCCGATTATGAATATGTAACCTATGACAAAAATGAAAATATTAGTCACAGTGATTGTGAGGCCAGTTGCTGGAGCAATTGTTATTGCAATGGATTCAAAGAATTTACTGATGGAACTGGATGTATATTCTATCATTGGAATTCATCCGATAATAATACTATTGACGGTACTGTTTCTGGTGTAGACTTTTACATACTGGAGAACACACGGAAAATAACACCGCATCATCGCGGTAGGTCTACTGCAAACTTCCTCGTGCTTTTCTCAATAGACTAA 1182 0.4078 MWLWLWWSTSTHVQAADDSLKPGDTLNFSSPQLYSQSGKYFLHFYSIADEASIDTYMAIYSAYDNSIVWKGNREQSVDQTDAVLSLNFSGVLKIESHFLEKPIILYSPPQPINNTMATLLDTGNFVLQQLHPNGTKTLLWQSFDYPTDTLLPTMKLGVNHKTGHHWLLVSQLTQMHATPGVFSLEWEPTGQEMIIRRRGKVCWRSGKFRNNRFENIPEDAQRVLKYSIVSNEDEDSFSFISKNENHTRWWFLSDTGQLSHNQGYVVRADLCYGYNNDGGCQRWQDIPKCRNPGDVFTKKMLYPDYEYVTYDKNENISHSDCEASCWSNCYCNGFKEFTDGTGCIFYHWNSSDNNTIDGTVSGVDFYILENTRKITPHHRGRSTANFLVLFSID 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00453 393 Pfam PAN-like domain 289 347 IPR003609 -
Spst11g00453 393 Gene3D - 10 144 IPR036426 -
Spst11g00453 393 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 20 367 - -
Spst11g00453 393 Pfam D-mannose binding lectin 67 170 IPR001480 -
Spst11g00453 393 SMART blect_4 25 146 IPR001480 -
Spst11g00453 393 ProSiteProfiles Bulb-type lectin domain profile. 11 140 IPR001480 -
Spst11g00453 393 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 169 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00453 Spst-Chr11 25323727 25324908 Proximal