Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00449 ATGGGAGACATAAACAGGTGGCTATTGTCGTCTTATTTGAATGAAGGTGTTAACCATGATTATGCCATCCGAAGGTATTGTCCTGCAAGAATGGAGCAAGAGCAAGGAGGAGAGTGCCAAGATCAAGAGGGAGTAGTTTTTGATGATACTGAATTATGTTCTTCTGATGCTACCTGCAGCACTCCTTGTTTGGCTTCATCTGAGGTTGATGACTTTGTTGATAGCTTTATCAACATGGATCAGTATGAGTATGAGAAAGCGGATCAAGGGTCCCAAGAGAAGCATCAAAGTTTTGGCCACTTTGTGGTAAATGATGATGAGGATGAGACTGATGCATACTCCTTGGTGAATGGTATCTTTGGATATCTTCCAACCACCATAGAGGATTCAGAATTGGAAATCTATGAAAATCTCACAACATCCATGTTAGAGGAAGAGGTTGCAATGAGTGGCTCTTTTGGTCCTATACCTGACTTTGTGCCTTGTGCACAAGAGGCCAACCTTGGTGTGGACCAAGGGTTAGACTTGGTTCACATGCTGCTGGCCTGTGCTGAAGCTGTAGGGTGTAGGGACAACCAGCAGGCAGAGTTGCTGCTTAGCAGAATTTGGGCTTTGGCAAGCCCTTCAGGAGATGCACTGCAACGAGTCTCCTACTGTTTTGCCACAGGATTGAAGTGTAGGTTGTCACTTCTTCCTTATCATGTCATTGCAAATGGTACACTTCCAAGTACTTCCATGGATATGCACTTAATCAACAGGGAGAATAAGCTGGAAGCATTTCAGCTTCTTTACCAAACCACACCTTACATTGCCTTTGGTTTCATGGCTGCAAATGAAGCCATATGCCAAGCATCACAAGGAAAGAGCTCAGTACACATTGTTGATTTTGGAATGGAGCATACCCTTCAGTGGTCTTCCCTGATAAGGGCCCTTGCTTCAAGGCCTGAGGGGCCTCCAACGCTCCGGATCACCGGATTAACCGGCAATGAAGACACCTCTAAACTTCAAACTACCATGAATGTGCTTGTGGAGGAAGCAAGCTCAATGGGAATGCATCTTGAATTCCAGACAATTTCTGAGCCTGTAACTCCATCTATTCTTACTATGGAGAAGCTGAACTTGAGAAAAGGTGAAGCTTTATTTGTTAATAGTATCTTGCAGTTGCACAAATATGTCAAGGAAAGTAGAGGCTATCTAAAGGAAATTCTCTTATCAGTAAAAAGGTTAGGTCCAATTGCTCTTACAGTGGTAGAGCAAGACACAAACCATAATGGCCCTTTCTTCCTTGGGAGATTTTTGGAATCACTTCACTACTACTCAGCCATATTTGATTCTCTTGAGGCATGTATGCCAAGAAATAGCCAACATAGGATGAAGATAGAGAGATTACACTTTGCAGAGGAAATTAGGAATATAGTAGCTTATGAGGGTCCAGATAGAATAGAAAGGCATGAAAGGGTAGACCAATGGAGAAGACAATTAGGCCGAGCAGGATTTCAGGTGATGCCACTGAAGTGCACAAGTCAAGTTAGAATGATGCTTTCTGTTTATGACTGTGATGGATACACATTGTCCAGTGACAAAGGAAACCTTCTTCTTGGATGGAAAGGAAAGCCAGTAATGATGTCTTCTGCATGGCAAGTGGCAAGTGGGTGA 1656 0.433 MGDINRWLLSSYLNEGVNHDYAIRRYCPARMEQEQGGECQDQEGVVFDDTELCSSDATCSTPCLASSEVDDFVDSFINMDQYEYEKADQGSQEKHQSFGHFVVNDDEDETDAYSLVNGIFGYLPTTIEDSELEIYENLTTSMLEEEVAMSGSFGPIPDFVPCAQEANLGVDQGLDLVHMLLACAEAVGCRDNQQAELLLSRIWALASPSGDALQRVSYCFATGLKCRLSLLPYHVIANGTLPSTSMDMHLINRENKLEAFQLLYQTTPYIAFGFMAANEAICQASQGKSSVHIVDFGMEHTLQWSSLIRALASRPEGPPTLRITGLTGNEDTSKLQTTMNVLVEEASSMGMHLEFQTISEPVTPSILTMEKLNLRKGEALFVNSILQLHKYVKESRGYLKEILLSVKRLGPIALTVVEQDTNHNGPFFLGRFLESLHYYSAIFDSLEACMPRNSQHRMKIERLHFAEEIRNIVAYEGPDRIERHERVDQWRRQLGRAGFQVMPLKCTSQVRMMLSVYDCDGYTLSSDKGNLLLGWKGKPVMMSSAWQVASG 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00449 551 ProSiteProfiles GRAS family profile. 167 547 IPR005202 -
Spst11g00449 551 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 133 542 IPR005202 -
Spst11g00449 551 Pfam GRAS domain family 176 547 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00449 Spst-Chr11 25264435 25266090 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00449 171 548 GRAS Transcription Factor Family AT1G66350 38.120 5.37e-77 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst11g00449 GRAS 2e-108 CL0063