Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00447 ATGGAATCGCCGTTCAAAGCAGGAATTCTGAAGGGGAAGGTCGCTCTGATAACAGGCGGAGCCTCCGGAATCGGCTTCGAAATTTCGACACAATTCGGTAAACATGGAGCCTCCGTCGCACTCATGGGTCGCCGCAAGCAAGTTCTTCAGTCCGCTGTCTCCGTTCTCCAATCCCTCGCCATTCCTGCGGTTGGGTTTGAGGGGGATGTACGGAAGCAAGAGGATGCAGCAAGGGTAGTGGAATCGACGTTTAAGCATTTTGGAAAGATTGATATACTTGTCAATGCTGCGGCTGGGAACTTTCTTGTTTCAGCAGAGGATCTCTCCCCAAATGGCTTTCGAACAGTTTTGGACATTGATTCTGTTGGCACATTCACAATGTGCCGTGAAGCACTAAAATATCTCAAGAAAGGAGGAGAAGGAAGGAGCAGCTCTTCTTATGGGGGATCAATCATAAACATTAGTGCTACCTTGCATTACACAGCTTCTTGGTACCAAATTCACGTGTCTGCTGCAAAGGCAGCTGTTGATGCCACTACAAGAAACTTGGCACTAGAATGGGGAACAGACTATGATATTAGGGTCAATGGGATTGCACCAGGTCCAATAAGTGACACTCCTGGCATGAGTAAACTGGCTCCTGACGAAATAAGTAGCAAAGCCAGAGATTACATGCCACTGTATAAACTTGGGGAGAAATGGGATATAGCCATGACTGCACTTTTCCTAGTATCAGATGCAGGAAAATTCATCAATGGCGACACTGTGATAGTTGACGGAGGACTTTGGCTGAGCCGGCCTCGTCATCTAGCGAAAGAGGCTGTGAAGCAAGTATCTCGATCAGTAGAAAAGAGATCCAGAAATGCACCAATTGGTGTTCCAAAAAGCAAGCTGTGA 897 0.4716 MESPFKAGILKGKVALITGGASGIGFEISTQFGKHGASVALMGRRKQVLQSAVSVLQSLAIPAVGFEGDVRKQEDAARVVESTFKHFGKIDILVNAAAGNFLVSAEDLSPNGFRTVLDIDSVGTFTMCREALKYLKKGGEGRSSSSYGGSIINISATLHYTASWYQIHVSAAKAAVDATTRNLALEWGTDYDIRVNGIAPGPISDTPGMSKLAPDEISSKARDYMPLYKLGEKWDIAMTALFLVSDAGKFINGDTVIVDGGLWLSRPRHLAKEAVKQVSRSVEKRSRNAPIGVPKSKL 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00447 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 IPR002347 -
Spst11g00447 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 169 188 IPR002347 -
Spst11g00447 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 157 IPR002347 -
Spst11g00447 298 CDD TER_DECR_SDR_a 10 264 - -
Spst11g00447 298 PRINTS Glucose/ribitol dehydrogenase family signature 191 208 IPR002347 -
Spst11g00447 298 PRINTS Glucose/ribitol dehydrogenase family signature 143 159 IPR002347 -
Spst11g00447 298 PRINTS Glucose/ribitol dehydrogenase family signature 226 246 IPR002347 -
Spst11g00447 298 PRINTS Glucose/ribitol dehydrogenase family signature 88 99 IPR002347 -
Spst11g00447 298 PRINTS Glucose/ribitol dehydrogenase family signature 169 188 IPR002347 -
Spst11g00447 298 PRINTS Glucose/ribitol dehydrogenase family signature 14 31 IPR002347 -
Spst11g00447 298 Pfam Enoyl-(Acyl carrier protein) reductase 19 262 - -
Spst11g00447 298 PANTHER PEROXISOMAL 2,4-DIENOYL-COA REDUCTASE 2 286 IPR045017 GO:0008670|GO:0009062
Spst11g00447 298 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 264 IPR036291 -
Spst11g00447 298 Gene3D - 2 289 - -
Spst11g00447 298 FunFam Short-chain dehydrogenase reductase 3 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00447 Spst-Chr11 25230986 25234918 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00447 1 298 Acyl Lipid Metabolism Gene Families AT3G12800 79.195 7.65e-165 458