Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00440 ATGGCAGAGGAGTTGATTTTGTTGGACGATTGGCTTAGTATGTTTGGCATGAGAGCGAGGATCGCACTGGCAGAAAAGGAGATAAAGTATGAGTACAGGGAAGAGGATCTGTCGAACAAGAGTCAACTGCTTCTGCAAATGAACCCAATTCACAAGAAGATCCCAGTTCTCATCCATAATGGGAAACCCATTTGTGAGTCCATCATTATTGTTGAGTATCTTGATGAGCTTTGCAAGGACAAAGTTTCTTTCCTACCCTCAGACCCTTATCAGAGAGCTCAGGCCAGGTTCTGGGCTGATTTTGTCAACAAGAAGGTTGGTGATGTTGGGGGGAGGATATGGTCTATGAAGAGAGAAGGGATTGAAGTGGCAAAGAAGGAGTTAGTGGAGAGCTTAAAGGAATTGGAGAAGGAACTTGGAGATAAACCTTACTTTGGAGGTGAAACATTTGGATTTGTTGACATTGCTCTCGTCCCTTTCTACACCTGGTTTTATACTTATGAGGAATTGGGGAACTTCAAAGTGGAGGCGGAGTGTCCTAAGATCATTGCTTGGGCAAAGAGATGCAATCAGAGGGAGAGTGTTTCCAAATCTCTTGCTGATGAAAAAGAGGTTTATGAGTTTGTTGCAAGCTACAGAAAGAGCCTTCACTTGGACGATTAG 663 0.4359 MAEELILLDDWLSMFGMRARIALAEKEIKYEYREEDLSNKSQLLLQMNPIHKKIPVLIHNGKPICESIIIVEYLDELCKDKVSFLPSDPYQRAQARFWADFVNKKVGDVGGRIWSMKREGIEVAKKELVESLKELEKELGDKPYFGGETFGFVDIALVPFYTWFYTYEELGNFKVEAECPKIIAWAKRCNQRESVSKSLADEKEVYEFVASYRKSLHLDD 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00440 220 CDD GST_C_Tau 89 209 IPR045074 GO:0004364|GO:0006749
Spst11g00440 220 FunFam Glutathione S-transferase U20 88 219 - -
Spst11g00440 220 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Spst11g00440 220 CDD GST_N_Tau 5 76 - -
Spst11g00440 220 SUPERFAMILY Thioredoxin-like 6 105 IPR036249 -
Spst11g00440 220 Gene3D - 88 219 - -
Spst11g00440 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Spst11g00440 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 212 IPR010987 -
Spst11g00440 220 Pfam Glutathione S-transferase, C-terminal domain 122 188 - -
Spst11g00440 220 SFLD Glutathione Transferase (cytosolic) 2 217 IPR040079 -
Spst11g00440 220 FunFam Tau class glutathione S-transferase 1 87 - -
Spst11g00440 220 Coils Coil 118 138 - -
Spst11g00440 220 SUPERFAMILY GST C-terminal domain-like 83 215 IPR036282 -
Spst11g00440 220 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Spst11g00440 220 Gene3D Glutaredoxin 1 87 - -
Spst11g00440 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 207 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00440 Spst-Chr11 25099594 25100708 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00440 1 219 Glutathione S-transferase Gene Family AT1G17180 62.557 7.71e-102 292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01572 5 50163455 50164223 Spst11g00440 11 25099594 25100708 PCT
Spst11g00440 11 25099594 25100708 Spst5g01573 5 50209743 50210548 PCT