Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00430 ATGTATGTTATATTGAAGGATCCTACCAACAAAGTGTCATTATATCTTGAGGACGAAGTAGCAAAGTCTAGGAATGAGACTTTACTATTACAATCAGAACTTGATGAGTGGAAGAATCGAGCAAATTTTGCTAGAGAAAAATTTCAAAGCCTCAAGAGAGAATCAAACAACCAGTTGCTTGTGTTGACGAAGGAAAAGGAATCAATAGCAGATGCTGAAAAGAAAGCCTGCAATGTGATTCATAGTTTACATGAAAGCCTAAACCACTTGCAGGTCTTGGATTTGACTAATTCAGTTTCCACTTTCCAGTACTTGATAGTTGTCCAAGCTTTTCTGTATCACCCTATTGTTAATTTAACTACCACACAGAATGCAGTACAAGAAAGCAATGCTGAGAAGAGAAAGCTAGAAGAACATGTACAATATTTAGAGAGTGAATGTGATAACCTGAAGAAAGTACTGCAAGAAGAGCATAAACTTGCTCAACGTCTTGCAGTGGAATCTGGCAAGAGTCATGAGGCTGCAAAACTAGCCATGAAAGAAGTTGAAGCAGTAAGACAGGAGCTACAAGAAGAGAGAGAACATTCCCAACGACTTAGGGAGAATTTTCGTAGGGATCTTATATTTGCTGAATCTAGAGCTGCATTTGCTGAGGCAAAACTCAGTGGTCTTTATAAAAATATCAGAATGTCAGATTATAAGGTTTGTTCTATATGCCTTTCCAATGACAAGGACTTGGCCTTTGGATGTGGACACATGACTTGTAGAGAATGCGGAACAAAATTATCAAGGTGTCCTATATGCCGAAAGCAGATCACAAACCTTATTAAGCTGTTTCCTGGTTGA 846 0.383 MYVILKDPTNKVSLYLEDEVAKSRNETLLLQSELDEWKNRANFAREKFQSLKRESNNQLLVLTKEKESIADAEKKACNVIHSLHESLNHLQVLDLTNSVSTFQYLIVVQAFLYHPIVNLTTTQNAVQESNAEKRKLEEHVQYLESECDNLKKVLQEEHKLAQRLAVESGKSHEAAKLAMKEVEAVRQELQEEREHSQRLRENFRRDLIFAESRAAFAEAKLSGLYKNIRMSDYKVCSICLSNDKDLAFGCGHMTCRECGTKLSRCPICRKQITNLIKLFPG 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00430 281 ProSiteProfiles Zinc finger RING-type profile. 236 269 IPR001841 -
Spst11g00430 281 PANTHER CASPASE REGULATOR, RING FINGER DOMAIN-CONTAINING 82 279 - -
Spst11g00430 281 SMART ring_2 236 268 IPR001841 -
Spst11g00430 281 Coils Coil 119 153 - -
Spst11g00430 281 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 222 280 IPR013083 -
Spst11g00430 281 Pfam Zinc finger, C3HC4 type (RING finger) 234 274 - -
Spst11g00430 281 Coils Coil 172 206 - -
Spst11g00430 281 Coils Coil 34 54 - -
Spst11g00430 281 SUPERFAMILY RING/U-box 235 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00430 Spst-Chr11 25005600 25007472 Tandem