Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00425 ATGGCGAAAAAGGCAGTGTTGATCGGAATCAACTACCCGGGGACGAAGGCGGAGCTGAGAGGTTGCATAAACGACGTGTGGCGGATGCATCGCTGCCTCGTCGAGCGTTACGGATTCTCCGAAGACAACATCACCGTTTTGATCGACACGGACAGGTCGTACACGGAGCCCACGGGGAAGAACATTCGATCGGCGTTGACATCACTGGTCCAATCGGCGGAACCGGGGGATGTGCTGTTCGTGCACTACAGCGGACACGGTACGCGCCTGCCTGCGGAAACGGGAGAGGATGATGACACTGGATATGATGAATGCATTGTTCCTTCTGATATGAATCTTATCACTGATGATGATTTCAGGGAATTTGTGGATGGGCTCCCTAGAGGTTGCAAGATCACAATTGTGTCTGATTCTTGCCACAGTGGTGGCCTACTTGAAGAAGCCAAGGAGCAGATAGGACACAGCACAAAGGGAGCGGAGGAACAGTCTGGCTCTGGCTCTAGCTTTGGATTTTCAAGTTTTCTACATCGTACTGTGGAAGATGCCATTGAGTCTCGCGGATTCCATATCCCGTCAGGATTGCGCCACCACAAAGGCAGGGATGATGGAGATGAAGATAGGGATATTGATCTTCCACATGGGGACTATGGCTATGTAAAGAGTAGATCTTTGCCCCTTTCAACCCTTATTGATATACTCAAGCAGAAAACCGGGAAAGATGATATTGATGTTGGAAAACTGAGACCTACCCTTTTTGATGTCTTTGGGGAAGATTCTAGTCCTAAAGTGAAGAAGTTCATGAATGTTATTTTGAATAAACTTCAACAAGGAGGTGGTGAAGGTGGGGGTGGAATAATGGGGTTGGTGGGTGGTCTTGCCCAAGAGTTTCTCAAGCATAAGATTGATGAGAATGATGAGGGATATACAAAGCCTGCACTGGAGACACAAGTGAAAAATAAGCATGAGGCCTATGCTGGATCGTCCACACACGGCCTTCCGGATGGTGGGATTCTGATGAGTGGATGTCAGACTGACCAAACTTCTGCAGATGCAAGTCCTTCAGGAAACGCTTCCGGTGCTTATGGAGCTTTTAGCAATGCAATACAGGCTATAATTGCGCAGAGTGATGGTGCAATCACAAACCAAGAACTTGTTCAGAAGGCACGGGAGAAGCTCAAGAGGGAGGGTTTTACTCAGAAACCCGGACTCTATTGCAGTGATCACCATGTTGATGCTCCTTTTGTGTGTTGA 1251 0.4828 MAKKAVLIGINYPGTKAELRGCINDVWRMHRCLVERYGFSEDNITVLIDTDRSYTEPTGKNIRSALTSLVQSAEPGDVLFVHYSGHGTRLPAETGEDDDTGYDECIVPSDMNLITDDDFREFVDGLPRGCKITIVSDSCHSGGLLEEAKEQIGHSTKGAEEQSGSGSSFGFSSFLHRTVEDAIESRGFHIPSGLRHHKGRDDGDEDRDIDLPHGDYGYVKSRSLPLSTLIDILKQKTGKDDIDVGKLRPTLFDVFGEDSSPKVKKFMNVILNKLQQGGGEGGGGIMGLVGGLAQEFLKHKIDENDEGYTKPALETQVKNKHEAYAGSSTHGLPDGGILMSGCQTDQTSADASPSGNASGAYGAFSNAIQAIIAQSDGAITNQELVQKAREKLKREGFTQKPGLYCSDHHVDAPFVC 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00425 416 Pfam Caspase domain 3 409 IPR011600 GO:0004197|GO:0006508
Spst11g00425 416 SUPERFAMILY Caspase-like 6 135 IPR029030 -
Spst11g00425 416 Gene3D - 299 415 - -
Spst11g00425 416 Gene3D - 1 181 - -
Spst11g00425 416 PANTHER METACASPASE-4 2 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00425 Spst-Chr11 24960277 24963134 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01735 5 53001594 53003491 Spst11g00425 11 24960277 24963134 PCT