Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00420 ATGTGGTACAAGAACACAAAAGCCCTGGCACAGTTGATGTTGGTAGGAACAGTGATGGTTGGCATGGCAATGGGAGATTCATCGAAGGACAAGGAGGAATGCACAGAGCAGTTGGCAGGGCTAGCAACATGTTTGCCCTATGTTGGGGGCCAAGCACAAGCTCCAACCCCAGATTGTTGCAGTGGTCTCAAACAAGTGCTGAAGAACAAGAAAAAGTGTTTGTGTGTAATAATCAAAGATCGCAATGATCCTGATCTTGGTGGTTTGCAGATTAATGTCACTTTGGCTTTGAACCTCCCCACTGCTTGCAATTCCCCAGTCAATGTGTCCAAGTGTCCCGAGCTGTTGCAGATGGATCCCAAATCACCAGAGGCACAAGTGTTTTATCAGCTGGAGAAAGGCTCCACAAAAAATGGCACAAGTCCTGCACCAACTCCTTCAGCTAAAGTTGGGGCAAATCCTTCAAGCAACCAGACAGCCACTACACAGAACAATGATGCATTCTGCAAAGACAATAGAATTTTTGGATTAAATGTTTTGGCTATTGCACTTCAAGTTTGGGCTTTAATTGGGCTTTTCTGCTAA 585 0.453 MWYKNTKALAQLMLVGTVMVGMAMGDSSKDKEECTEQLAGLATCLPYVGGQAQAPTPDCCSGLKQVLKNKKKCLCVIIKDRNDPDLGGLQINVTLALNLPTACNSPVNVSKCPELLQMDPKSPEAQVFYQLEKGSTKNGTSPAPTPSAKVGANPSSNQTATTQNNDAFCKDNRIFGLNVLAIALQVWALIGLFC 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00420 194 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 33 113 IPR036312 -
Spst11g00420 194 Gene3D - 31 124 IPR036312 -
Spst11g00420 194 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 17 154 IPR043325 -
Spst11g00420 194 Pfam Probable lipid transfer 17 112 IPR016140 -
Spst11g00420 194 CDD AAI_LTSS 41 104 - -
Spst11g00420 194 SMART aai_6 34 112 IPR016140 -
Spst11g00420 194 PRINTS Plant phospholipid transfer protein signature 33 49 IPR000528 GO:0006869|GO:0008289
Spst11g00420 194 PRINTS Plant phospholipid transfer protein signature 54 68 IPR000528 GO:0006869|GO:0008289
Spst11g00420 194 PRINTS Plant phospholipid transfer protein signature 90 107 IPR000528 GO:0006869|GO:0008289
Spst11g00420 194 MobiDBLite consensus disorder prediction 134 163 - -
Spst11g00420 194 FunFam Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 31 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00420 Spst-Chr11 24830056 24830913 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00420 26 166 Acyl Lipid Metabolism Gene Families AT2G44300 63.830 2.36e-59 182