Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00418 ATGGAGACGATTGTGGAGCAAAGTCCGTGTGATTTCGTTGCTGCTGCAACAGATGAAGATATGAAGGATTCGTATTTGAATGCGCAGGAAAAGAGCGATGTCCACGTCGACGAGGGCAGAACCAAAAGGAGCCCATGTTTGGACAAACATGTTCTGCTGTTTCCTCCTGCCTCTGAATCAACTAGTGCTATAGGACCTTCAGAGCATTTTAAAGTGGGTCTGTTTCATGAAATTGATCATTCCAGGCTCTCACCAATTTCGCCAGTGCAACTAAAATCTGTTCGCATTGTAATGGTCAGTGACGTAGGGGAGCAACTGGTGTCGCTAAGGTACCCAAGCCTCCAATCACTTCGTATGCATTTCAGCGACCAAAACTTTGGAAAACCGGACGGGAAGACGATCCCTCCACTCGACGAGAAGTACGTGATGGGGATGGACTTCGCCACCAAAGCGCTTTCTAGGAGCATCCCAACGGAGGAATTTGCACAAAGAAGAAACTCATGGAGCTTCTGGGTCTCTCCCTCCAAAGAAAACACCCAAGACTCTGAGAATCCAGCTCTCATTGATGCCGCAAGGAGCCTCATTTCCAAGCAGGGTTCTTGCTGGACTCAGCTCAAGTTCACAGGGATGATGCAGTGGGGCAAACGCCGGCAAGTTCGGTTCTTGGGCCGTCATGAAGAGCCAAAGGTTGAATCTTTACCGGAACTGTGTAACGAGAAAATGATCAGTGTTAAACTCAGAGAAGGAACTAGTGAGAAGAAAAGGAAGAAAGGAGAAGAAGAAATGGAGGCAAGCAAGGCAGATTCTTTTGAGGTTTTGAGGATGACGCGTCAATGTAGGCAAAATCATCAAAATTTGAGTAGCAGTGGGGTTAAAAAATCTAAGAAAGCAAAGAATGACCCCAAGAAGCAGCAACTCGTGGTTTACAACAAAAACAAGCGGAAAATCTCTATTGGAAGATGGTCTGCTGAGAGGTATATGCTGGCAGAGGAGAACATGTTGAAGGTTATGAAAGAGAAAAGAGCTGTGTATGGGAACCCAATATTGAGGCCAGATTTAAGGTCAGAAGCACGAAAGTATATCGGTGATACGGGTCTGCTAGATCATTTGCTAAAGCACATGGCTGGAAAAGTGGCACCCGGAGGAGCTGAGAGATTCCGACGGCGTCACAATGCTGAGGGCGCAATGGAATACTGGTTAGAGAATGCTGATCTTGTTGAAATGAGGAAGGAAGCAGGGGTACAAGACCCTTACTGGACTCCTTCCCCTGGATGGAAGCTTGGGGACAGCATTTCACAAGATTACGTTACCGGTCGTGAACTCAGAGAGATCAAGGAAGAAATCCTCAAGTTGAAACAAGATATGAGAGAGCTCGCATCAAAGAAGGGAGAGGAGGCATTGGCCATTGTGACTACTCCTAGCTCCTGTTTGTCTAGTTTGAATTCGGAGGACTGTGGTTTCTTGGCTCCAAAGCAGGAGATTTATGCGGAGTTGGTGAGTAAAAAGGCTAAAATAGAGGAACAATTGAAGGAAATTTCACTGTCTCTGAGTTGTATGGAGGAGCAACTTAGAATGCAACCAACAATGGTAGAGGAACAAATAATGTCAGAATCGGAAACACCCGAAGCCTTTTTCCCCGGACCAACCTCAGAAAACATAGGAGGGGAGACGAAGAAGGAAAAGAAAAGCAACAAGATCAAAGCAACAAAAACAGCGGATACACAGATGCAAAAAAACAACAGTGCAGCAGAGGACAAGGCAGCAAAGATTGAAAGGCTGAAAAGTGGTTTCCAAATTTGCAAGCCTCAGGGAACCTTTGTGTGGCCAAATATAGGTCTGTCTCCCCAATATGTGGCCAACCATGATGACCACACTGTGGTCCCGACCCCACCATCAGCTTCCTCTTCTACCACCTCGGCCCCAAAGCTCATTTTCAAACCGCAGCCTCAGCACCTACCATTACATATCCTAACCCATCCATCTTCCCCTGTGAAGCCACTTGCAGAGAGGCGCCCTGTGAGCACAGCTACTTTGACCCATGTTACTGGCCCATTCTCCCCTCGCCTTTCGCCACCATCAGGGACCCCAATATCCAAAATCACCACCACCATCACCATTAACCTCAATGAGGCCCCTCTCACTCTGGAGTAG 2151 0.4719 METIVEQSPCDFVAAATDEDMKDSYLNAQEKSDVHVDEGRTKRSPCLDKHVLLFPPASESTSAIGPSEHFKVGLFHEIDHSRLSPISPVQLKSVRIVMVSDVGEQLVSLRYPSLQSLRMHFSDQNFGKPDGKTIPPLDEKYVMGMDFATKALSRSIPTEEFAQRRNSWSFWVSPSKENTQDSENPALIDAARSLISKQGSCWTQLKFTGMMQWGKRRQVRFLGRHEEPKVESLPELCNEKMISVKLREGTSEKKRKKGEEEMEASKADSFEVLRMTRQCRQNHQNLSSSGVKKSKKAKNDPKKQQLVVYNKNKRKISIGRWSAERYMLAEENMLKVMKEKRAVYGNPILRPDLRSEARKYIGDTGLLDHLLKHMAGKVAPGGAERFRRRHNAEGAMEYWLENADLVEMRKEAGVQDPYWTPSPGWKLGDSISQDYVTGRELREIKEEILKLKQDMRELASKKGEEALAIVTTPSSCLSSLNSEDCGFLAPKQEIYAELVSKKAKIEEQLKEISLSLSCMEEQLRMQPTMVEEQIMSESETPEAFFPGPTSENIGGETKKEKKSNKIKATKTADTQMQKNNSAAEDKAAKIERLKSGFQICKPQGTFVWPNIGLSPQYVANHDDHTVVPTPPSASSSTTSAPKLIFKPQPQHLPLHILTHPSSPVKPLAERRPVSTATLTHVTGPFSPRLSPPSGTPISKITTTITINLNEAPLTLE 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00418 716 Coils Coil 441 461 - -
Spst11g00418 716 MobiDBLite consensus disorder prediction 554 568 - -
Spst11g00418 716 MobiDBLite consensus disorder prediction 281 304 - -
Spst11g00418 716 MobiDBLite consensus disorder prediction 248 267 - -
Spst11g00418 716 MobiDBLite consensus disorder prediction 538 582 - -
Spst11g00418 716 Coils Coil 495 522 - -
Spst11g00418 716 PANTHER PROTEIN DYAD 67 681 IPR044221 GO:0007131|GO:0051177|GO:0051321
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00418 Spst-Chr11 24821310 24827821 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00418 320 402 PHD Transcription Factor Family AT5G22260 41.860 8.18e-06 47.4