Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00399 ATGTCACTTGTTGGTAAAATCAGCACTGAAATTGGAGTACATGCAACTGCTGCAAAGTGGTTCAACCTCTTTGCCACTAAACTTCATCATGTTCAAAACCTTACTGACAGAGTTCATGGAACTAAGCTGCATCATGGTGAGGACTGGCACCACAACGAATCCATCAAACACTGGACTTATACTATAGATGGTAAGGTTACAACATGTCAGGAAAGGATTGAATCAGTTGATGAGGCAAACAAAACAATCATCTACAAGCTCTTCAATGGGGACATCGATCAGCAGTTCAAGCACTTCAAGCTCATATTTCAAGCAATTGAGAAGAATGATGGTGGTGCTATTATCAAATGGACCATCGAATATGAGAAGGTTGCTGATGAAGTTGATCCTCCATACGGCTACATCGAGTACGTTCACAAATGCACTAGAGATATCGATGCTCATCTTCTCAAGGCATAA 459 0.4096 MSLVGKISTEIGVHATAAKWFNLFATKLHHVQNLTDRVHGTKLHHGEDWHHNESIKHWTYTIDGKVTTCQERIESVDEANKTIIYKLFNGDIDQQFKHFKLIFQAIEKNDGGAIIKWTIEYEKVADEVDPPYGYIEYVHKCTRDIDAHLLKA 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00399 152 CDD Bet_v1-like 5 131 - -
Spst11g00399 152 SMART Bet_v_1_2 2 152 IPR000916 GO:0006952
Spst11g00399 152 PRINTS Major pollen allergen Bet V1 signature 4 24 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Spst11g00399 152 PRINTS Major pollen allergen Bet V1 signature 67 86 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Spst11g00399 152 PRINTS Major pollen allergen Bet V1 signature 110 126 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Spst11g00399 152 PRINTS Major pollen allergen Bet V1 signature 141 151 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Spst11g00399 152 Gene3D - 1 152 IPR023393 -
Spst11g00399 152 SUPERFAMILY Bet v1-like 1 151 - -
Spst11g00399 152 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN 1 152 - -
Spst11g00399 152 Pfam Pathogenesis-related protein Bet v 1 family 2 151 IPR000916 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00399 Spst-Chr11 23960291 23960989 Dispersed/Tandem