Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00346 ATGGGGGCAGCTGAAGAGGCCGCTCAAAATCCTGTGAAGAAGGAATTAGTTGCTGATGCAGAAAATCCTGTTAGTGATGATGATGCAAAGACTCCAGGAGGTGGAGAAACTCCTACAATAAAGGGCATAGATGGTCTTGAAGAAACAACTGTCAAAGAAATAAAACCTTGTCTTCCAAATGAAGCTAGTGAGATGTTGAAATCATTGGCAAGTAAATGGGAGAATGTAATTGATGCCGATGCATTGCAAGTAATCCCTCTGAAAGGGGCAATGACCAATGAGGTTTTCCAGATAAAATGGAAGACAACGGAAGGAGAATCCTCGAGAAAAGTTGTGGTAAGAATCTATGGTGAGGGCACTGGTATTTTCTTTGATAGGGATGTTGAGGTCAAAACATTTGAATTCATGTCAAAGAGTGGACAAGGGCCTCTTTTGCTAGGAAGGTTTGGTAATGGTCGCATTGAAGAATTTATCCATGCAAGGACATTAACAGCATCTGATATACGAGATCCATCTACTTCTGCTCTTATAGCAGCCAAAATGAAGGAGTTTCATGACATTGATATGCCTGGTCCAAAGACTGTGAACCTCTGGAATAGGTTAAGAGATTGGATCAGTGAAGCCAAACGCTTGTGTTCTCCTGAAGATATTGAAGAATTTCATTTCGACACTTTTGAAAAGGATTTATCAACTCTGGAAAGTGAATTATCAAGCACTGAACAACGCATAGGATTTTGCCACAACGATTTGCAATATGGCAACATAATGCTTGACGAAGAGACCAATTCTGTCACCATAATAGATTATGAATATGCAAGTTACAATCCTGTGGCATATGATATTGCAAATCACTTCAATGAGATGGCTGCCAACTATCACACAGATACCCCACATGTTCTTGACTTCACCAAATATCCTGATGAGGAACCAAGTGACCCTGAAGTGGAGCAATTGCTTGAGGAAGTTGAGAAGTATGCGCTTGCAAATCATATATCGTGGGGCGTTTGGGGATTAATTTCGACACATGGCATGAAGAAACTTCAATTTGATAATTTGCTTGAGTAG 1065 0.4038 MGAAEEAAQNPVKKELVADAENPVSDDDAKTPGGGETPTIKGIDGLEETTVKEIKPCLPNEASEMLKSLASKWENVIDADALQVIPLKGAMTNEVFQIKWKTTEGESSRKVVVRIYGEGTGIFFDRDVEVKTFEFMSKSGQGPLLLGRFGNGRIEEFIHARTLTASDIRDPSTSALIAAKMKEFHDIDMPGPKTVNLWNRLRDWISEAKRLCSPEDIEEFHFDTFEKDLSTLESELSSTEQRIGFCHNDLQYGNIMLDEETNSVTIIDYEYASYNPVAYDIANHFNEMAANYHTDTPHVLDFTKYPDEEPSDPEVEQLLEEVEKYALANHISWGVWGLISTHGMKKLQFDNLLE 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00346 354 CDD ETNK_euk 82 339 - -
Spst11g00346 354 MobiDBLite consensus disorder prediction 1 42 - -
Spst11g00346 354 Coils Coil 222 242 - -
Spst11g00346 354 Gene3D Phosphorylase Kinase; domain 1 69 157 - -
Spst11g00346 354 Gene3D - 117 350 - -
Spst11g00346 354 PANTHER CHOLINE/ETHANOALAMINE KINASE 55 351 - -
Spst11g00346 354 Pfam Choline/ethanolamine kinase 108 309 - -
Spst11g00346 354 SUPERFAMILY Protein kinase-like (PK-like) 53 340 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00346 Spst-Chr11 17923527 17926915 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00346 45 352 Acyl Lipid Metabolism Gene Families AT1G74320 59.877 7.97e-146 414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00346 11 17923527 17926915 Spst11g00346 11 17923527 17926915 ECH
Spst5g02020 5 55673036 55679180 Spst11g00346 11 17923527 17926915 PCT