Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00344 ATGGCCACTGAAAAGCTTAGAGGATGTGCAAAGTTCTTTGCAAGCTCAAAACCCTACTTGGCCATGATCTCTTTACAGTTTGGCTATGCTGGCATGAACATTATCACTAAGGTTTCCCTCAACCAAGGTATGAGCCACTATGTTCTTGTGGTTTATCGTCACGCCTTCGCCACTGCTGTCATAGCTCCTTTTGCATTTATCTTTGAAAGGAAAGGTCAACCGAAGATAACATTCCCAATTTTCATGCAAATTTTTATCCTAGCTCTTCTCGGGCCTGTGATTGATCAAAATTTCTACTATGCTGGGTTGAAGCTCACATCTCCAACCTTCTCATGTGCAATGAGCAACATGCTTCCAGCTATGACTTTTGTGATGGCAGTGTTTTGCCGGATGGAGAAGATAAACATAAAGCAAGTAAGATGCATCGCAAAGATAGTGGGAACATTAGTGACAGTTGCAGGGGCTATGCTAATGACCTTATACAGAGGTCCTTTAGTTGAGATGATTTGGGCCAAACATCCCCACAATAAAACCAATGGAGCAACCACCACAGGATTAATGGACAAAGATTGGTTCTTAGGATGCATCTTTCTTATCATTGCCACCCTTGCTTGGGCTTCCCTCTTTGTTTTACAAGCAAAAGCTATACAAACGTACAAGAATCACCAGCTAAGCCTCACTTCACTTGTGTGCTTTATGGGAACTATTCAAGCTATTGCTGTTACTTTTGTTGTTGAACACAACCCTTCTGTATGGAGGATTGGCTGGGATATGAACTTACTTGCTGCTGCATATGCTGGGATTGTGACATCAAGCATATCATACTATGTACAAGGACTTGTAATTAAGAAGAAAGGACCTGTTTTTGCAACTGCCTTTAGCCCTTTAATGATGATCATTGTTGCCATCATGGGCTCCTTTATCCTTGCAGAACAAATTTATCTTGGAGGAGTGATTGGTGCCATCTTAATTGTTATAGGTTTATACTCAGTTCTATGGGGAAAGCACAAAGAACAAATAGAGAGCAAAGTGGCAGATGAAATTCCCCTGCCTGTAAAGGATGCTCAAATTTCTGTGATTGCAGGGCTAAATATGATTGATGGCACCAATGATCTTACTGAAGAAAAATATGGTCAGAAAGAAGAGTCCAAGCTTTCCTCAGTTGTAATAACCATGCCTATTAGAGAGCCTCCCACAAAAAATAACCAAGAGGGAAAGGCTTAG 1224 0.4118 MATEKLRGCAKFFASSKPYLAMISLQFGYAGMNIITKVSLNQGMSHYVLVVYRHAFATAVIAPFAFIFERKGQPKITFPIFMQIFILALLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFVMAVFCRMEKINIKQVRCIAKIVGTLVTVAGAMLMTLYRGPLVEMIWAKHPHNKTNGATTTGLMDKDWFLGCIFLIIATLAWASLFVLQAKAIQTYKNHQLSLTSLVCFMGTIQAIAVTFVVEHNPSVWRIGWDMNLLAAAYAGIVTSSISYYVQGLVIKKKGPVFATAFSPLMMIIVAIMGSFILAEQIYLGGVIGAILIVIGLYSVLWGKHKEQIESKVADEIPLPVKDAQISVIAGLNMIDGTNDLTEEKYGQKEESKLSSVVITMPIREPPTKNNQEGKA 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00344 407 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 337 - -
Spst11g00344 407 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 160 - -
Spst11g00344 407 PANTHER WAT1-RELATED PROTEIN 17 343 IPR030184 GO:0016020|GO:0022857
Spst11g00344 407 Pfam EamA-like transporter family 193 332 IPR000620 GO:0016020
Spst11g00344 407 Pfam EamA-like transporter family 18 158 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00344 Spst-Chr11 17910869 17912742 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00344 1 402 Nodulin-like Gene Family AT5G07050 64.337 0.0 535