Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00251 ATGGCGGCGATCGAGGACTTGTCGGAGCTTGCCGATTCTATGCGCCAAGCGGCGGCGCTTCTAGCTGACGAAGACGTGGATGACTCCAACTCCTCCTCCAATTCCCGAAGACCGTCTACTTTTCTCAACGTTGTTGCACTTGGCAATGTTGGTGCTGGTAAATCCGCTGCTCTCAACAGTTTGATTGGACATCCCGTACTGCCTACTGGTGAGAACGGAGCTACTCGTGCTCCTATATGCATTGATCTGCAGCGAGACACTTCTTTGAACAGCAAATCGATTATACTACAGATTGACAACAAGTCTCAGCAAGTCTCCGCAAGTGCTTTGAGACATTCGTTGCAGGACAGACTGAGTAAGGGATCCTCCGGCAAGAGTCGAGATCAAATTTATTTGAAGCTGCGCACGAGTACAGCACCATCTCTTAAATTGGTCGATTTACCTGGGCTGGATCAGCGCATCGTCGATGAGTCAATGGTTAGTGAATATGCAGAGCATAATGATGCCATTTTGCTAGTTATCGTACCTGCATCTCAAGCACCGGAGATTGCTTCATCTCGAGCCCTAAGACACGCAAAGGAATATGATGGAGAAGGTACCAGAACCATTGGCGTTATCAGTAAAATAGATCAAGCTGCTTCAGACCAAAAAGCACTGGCTGCTGTGCAAGCTCTCTTATTGAATCAAGGCCCTCCAAAAACATCAGATATCCCTTGGGTTGCATTAATTGGTCAATCAGTTTCCATAGCTACTGCACAGTCTGGATCTACTGGTTCTGAAAATTCTTTAGAAACTGCATGGAGAGCAGAGAGTGAAAGCCTCAAGTCCATATTGACCGGAGCTCCTCAAAGTAAGCTTGGAAGGATAGCTTTAGTGGATGCCCTGGCGCAGCAAATTCAGAATCGTATGAAGCTTCGACTTCCTAACCTTCTTTCTGGGTTACAAGGGAAGTCTCAGATAGTTCAGGATGAATTGGCTAGGCTTGGTGAGTCAATGGTTACTACTTCAGAGGGTACACGGGCTATAGCCTTGGAACTTTGCCGTGAATTTGAGGATAAGTTCCTACAGCACATTACCAGTGGCGAGGGATCTGGTTGGAAAATTGTTTCTTGTTTTGAGGGGAGATTTCCTGATAGAATGAAGCAACTACCTTTAGATAGGCATTTTGATATCAACAATGTGAAGAGGATTGTGTTAGAAGCAGATGGTTATCAGCCTTATCTTATTTCCCCTGAAAAGGGACTGAGATCTCTGATAAAAGGTGTTCTAGAGCTTGCAAAAGAACCATCACGTCTTTGTGTTGATGAGGTACATCGTGTCTTGATAGATATTGTTTCATCTGCTGCCAATGCTACACCTGGTTTAGGAAGATACCCACCTTTCAAGAGAGAGGTTGTGGCTATTGCTACTGCTGCACTAGAGGGGTTTAAGAATGAATCAAAGAAAATGGTGGTTGCACTAGTTGATATGGAACGTGCTTTTGTTCCACCACAACACTTCATTCGCTTGGTACAAAGGAGGATGGAAAGACAACGTCGAGAGGAGGAGCTGAAGGGGGGTCGACCCTCAAAAAAAGGGCAAGATGCTGAGCAATCTATACTTAACCGGGCCAGTAGTCCCCAAACTGGGGGGAGCATGAAATCAATGAAGGAGGATAAGAAAGAGAAAGAAAAGGACAAATCTGGTCAGGCAGAAAAAGAAGGGCAAGAAGGCTCGGGTTTAAAGACTGCTGGTCCTGAAGGAGAAATAACAGCAGGGTTTTTGTTAAAGAAAAGTGCTAAAACTAATGGTTGGAGCAGGCGATGGTTTGTGCTAAATGAGAAGACAGGAAAGCTTGGGTATACAAAAAAACAAGAGGAGAGACATTTTCGTGGTGTTATTACATTGGAGGATTGTAACATTGAAGAGGCTGGGGATGAAGATGATCCTCCATCTAAAAGCGCAAAAGACAAGAAGTCCAATGGAGCAGATTCTGGCAAAGTCAGCCTTGTGTTTAAAATTACCAATAGAGTTCCTTATAAATCTGTTCTGAAAGCACACAGTACCGTTATTTTGAAGGCTGAAAGTGCATCTGATAAGGTTGAATGGATTAATAAAATAAGTAATGTTATACAAGCAAAGGGAGGACAGATAAGGATCTCATCTGATGGTGGCTCTACCATGAGGCAAAGCCTCTCCGATGGTTCCTTGGTTAGGATGCTGAATGACACAATGGCTCGAAGACCTGCGGATCCTGAGGAAGAACTCAGATGGATGTCACAAGAAGTTCGTGGTTATGTTGAAGCAGTGTTAAATAGTTTGGCTGCTAATGTACCAAAGGCAGTTGTCCTTTGTCAAGTTGAAAAGGCTAAGGAAGACATGCTGAATCAATTATATAGCTCTGTCAGTGCTCAAAGCACTGCTAAGATTGAGGAGCTGCTTTTGGAAGATCAAAATGTAAAGCGCAGAAGAGAAAGAATCCAGAAACAATCTTCACTTCTCTCAAAATTGACACGCCAACTGAGTATTCATGACAATCGAGCAGCTGCTGCCTCTGGCTGGTCAAATGGTAGTGCAGAGAGTAGTCCAAAAAGCAGTGGACCAGGTGATGACTGGAGATCTGCCTTTGATGCAGCCGCCAATGGCCCTGTTAGTAGAAGTGGGTCTTCAAGATCGGGATCCAATGGTCACAGTCGACATTATAGTGATCCTGCACAAAATGGTGATGTGAACTCTGGTTCAAACTCCAGCAGCCGCCGAACACCTAATCGGTTACCACCCGCTCCTCCTCCGGGTTCTTCGGGTTACAAATATTAA 2796 0.4478 MAAIEDLSELADSMRQAAALLADEDVDDSNSSSNSRRPSTFLNVVALGNVGAGKSAALNSLIGHPVLPTGENGATRAPICIDLQRDTSLNSKSIILQIDNKSQQVSASALRHSLQDRLSKGSSGKSRDQIYLKLRTSTAPSLKLVDLPGLDQRIVDESMVSEYAEHNDAILLVIVPASQAPEIASSRALRHAKEYDGEGTRTIGVISKIDQAASDQKALAAVQALLLNQGPPKTSDIPWVALIGQSVSIATAQSGSTGSENSLETAWRAESESLKSILTGAPQSKLGRIALVDALAQQIQNRMKLRLPNLLSGLQGKSQIVQDELARLGESMVTTSEGTRAIALELCREFEDKFLQHITSGEGSGWKIVSCFEGRFPDRMKQLPLDRHFDINNVKRIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLCVDEVHRVLIDIVSSAANATPGLGRYPPFKREVVAIATAALEGFKNESKKMVVALVDMERAFVPPQHFIRLVQRRMERQRREEELKGGRPSKKGQDAEQSILNRASSPQTGGSMKSMKEDKKEKEKDKSGQAEKEGQEGSGLKTAGPEGEITAGFLLKKSAKTNGWSRRWFVLNEKTGKLGYTKKQEERHFRGVITLEDCNIEEAGDEDDPPSKSAKDKKSNGADSGKVSLVFKITNRVPYKSVLKAHSTVILKAESASDKVEWINKISNVIQAKGGQIRISSDGGSTMRQSLSDGSLVRMLNDTMARRPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAVVLCQVEKAKEDMLNQLYSSVSAQSTAKIEELLLEDQNVKRRRERIQKQSSLLSKLTRQLSIHDNRAAAASGWSNGSAESSPKSSGPGDDWRSAFDAAANGPVSRSGSSRSGSNGHSRHYSDPAQNGDVNSGSNSSSRRTPNRLPPAPPPGSSGYKY 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00251 931 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 67 76 IPR019762 -
Spst11g00251 931 MobiDBLite consensus disorder prediction 512 580 - -
Spst11g00251 931 MobiDBLite consensus disorder prediction 841 931 - -
Spst11g00251 931 FunFam Dynamin-2A 701 817 - -
Spst11g00251 931 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 317 IPR027417 -
Spst11g00251 931 MobiDBLite consensus disorder prediction 916 931 - -
Spst11g00251 931 MobiDBLite consensus disorder prediction 547 566 - -
Spst11g00251 931 PRINTS Dynamin signature 66 83 IPR022812 -
Spst11g00251 931 PRINTS Dynamin signature 197 213 IPR022812 -
Spst11g00251 931 PRINTS Dynamin signature 178 196 IPR022812 -
Spst11g00251 931 PRINTS Dynamin signature 41 59 IPR022812 -
Spst11g00251 931 SMART PH_update 582 707 IPR001849 -
Spst11g00251 931 FunFam Dynamin-2B isoform A 40 323 - -
Spst11g00251 931 MobiDBLite consensus disorder prediction 842 861 - -
Spst11g00251 931 Coils Coil 803 823 - -
Spst11g00251 931 Gene3D - 40 323 IPR027417 -
Spst11g00251 931 MobiDBLite consensus disorder prediction 639 656 - -
Spst11g00251 931 Pfam PH domain 586 704 IPR001849 -
Spst11g00251 931 FunFam Dynamin-2A 574 708 - -
Spst11g00251 931 MobiDBLite consensus disorder prediction 876 915 - -
Spst11g00251 931 Pfam Dynamin family 44 208 IPR045063 -
Spst11g00251 931 SUPERFAMILY PH domain-like 582 705 - -
Spst11g00251 931 PANTHER DYNAMIN 43 830 IPR022812 -
Spst11g00251 931 Pfam Dynamin GTPase effector domain 747 829 IPR003130 GO:0003924|GO:0005525
Spst11g00251 931 ProSiteProfiles GED domain profile. 749 842 IPR020850 -
Spst11g00251 931 MobiDBLite consensus disorder prediction 634 657 - -
Spst11g00251 931 Gene3D Dynamin, middle domain 705 817 - -
Spst11g00251 931 ProSiteProfiles PH domain profile. 581 705 IPR001849 -
Spst11g00251 931 Coils Coil 4 24 - -
Spst11g00251 931 SMART dynamin_3 4 250 IPR001401 GO:0003924|GO:0005525
Spst11g00251 931 FunFam Dynamin-2A 334 542 - -
Spst11g00251 931 Gene3D - 572 704 IPR011993 -
Spst11g00251 931 CDD DLP_1 44 308 IPR001401 GO:0003924|GO:0005525
Spst11g00251 931 Gene3D Dynamin, middle domain 335 556 - -
Spst11g00251 931 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 38 308 IPR030381 GO:0005525
Spst11g00251 931 Pfam Dynamin central region 262 499 IPR000375 -
Spst11g00251 931 MobiDBLite consensus disorder prediction 528 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00251 Spst-Chr11 8175145 8194453 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00251 11 8175145 8194453 Spst11g00251 11 8175145 8194453 ECH